RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 TMEM38BQ9NVV0 291 aa12.11□□□□□ -0.47
LSS-201ENST00000356396 KCNMB2Q9Y691 235 aa12.11□□□□□ -0.47
LSS-201ENST00000356396 A0A087WZY1 265 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 A0A0A6YYJ9 748 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 RLN1P04808 185 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 PSMA6P60900 246 aaKnown RBP12.1□□□□□ -0.47
LSS-201ENST00000356396 TNK1Q13470 666 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 TRAM1Q15629 374 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 ELFN2Q5R3F8 820 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 ATAD3CQ5T2N8 411 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 TMED4Q7Z7H5 227 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
LSS-201ENST00000356396 RBFOX1Q9NWB1 397 aaKnown RBP12.1□□□□□ -0.47
LSS-201ENST00000356396 B4GALT7Q9UBV7 327 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 KLRC4-KLRK1H3BQV0 150 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 VSIG8P0DPA2 414 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 ZNF708P17019 499 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 MMP16P51512 607 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 ZNF84P51523 738 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 FAM205BPQ63HN1 556 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 OR1M1Q8NGA1 313 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
LSS-201ENST00000356396 WNT5BQ9H1J7 359 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 ZNF222Q9UK12 451 aa12.1□□□□□ -0.47
LSS-201ENST00000356396 A0A0A6YYD4 124 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 GTF2F2P13984 249 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 ASAH1Q13510 395 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 AGAP6Q5VW22 663 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 GJC3Q8NFK1 279 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 TMEM54Q969K7 222 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 SNX18Q96RF0 628 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 SP140LQ9H930 580 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 ADAM30Q9UKF2 790 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 ISPDA4D126 451 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 CENPBD1B2RD01 187 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
LSS-201ENST00000356396 RAD52P43351 418 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 MAP2K6P52564 334 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 BAMBIQ13145 260 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 FCN2Q15485 313 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 PCK2Q16822 640 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 PYHIN1Q6K0P9 492 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 Q6ZTK2 550 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 P4HA3Q7Z4N8 544 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 CXorf67Q86X51 503 aaPredicted RBP12.09□□□□□ -0.47
LSS-201ENST00000356396 OR51S1Q8NGJ8 323 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 AKR7A2O43488 359 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 UBL3O95164 117 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 SYNGR4O95473 234 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 MAPK3P27361 379 aaPredicted RBP12.09□□□□□ -0.47
LSS-201ENST00000356396 BDKRB2P30411 391 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 IDH3GP51553 393 aaPredicted RBP12.09□□□□□ -0.47
LSS-201ENST00000356396 RAB1AP62820 205 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 CDC20Q12834 499 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 OIT3Q8WWZ8 545 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 REEP6Q96HR9 211 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 KCNJ15Q99712 375 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 SLCO5A1Q9H2Y9 848 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 NEK6Q9HC98 313 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 HRASLSQ9HDD0 168 aa12.09□□□□□ -0.47
LSS-201ENST00000356396 MYO18BQ8IUG5 2567 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 IGKV1-27A0A075B6S5 117 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 GGT3PA6NGU5 568 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 F8VVB4 439 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 F8VWA3 439 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 PDCD5O14737 125 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
LSS-201ENST00000356396 TCRBP04435 133 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 TPOP07202 933 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 FAM87AP0C7U9 286 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 KCNJ8Q15842 424 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 ACOT12Q8WYK0 555 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 CPNE4Q96A23 557 aaPredicted RBP12.08□□□□□ -0.48
LSS-201ENST00000356396 HAVCR1Q96D42 359 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 SEH1LQ96EE3 360 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 ABRACLQ9P1F3 81 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 GPR160Q9UJ42 338 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 USF3Q68DE3 2245 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 SLC17A2O00624 439 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 PHYHO14832 338 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 KCNAB3O43448 404 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 CSRP1P21291 193 aaKnown RBP12.08□□□□□ -0.48
LSS-201ENST00000356396 RRADP55042 308 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 TAF9Q16594 264 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 TMEM244Q5VVB8 128 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 SLC7A5P1Q8MH63 180 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 GPHA2Q96T91 129 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 OR2B2Q9GZK3 357 aa12.08□□□□□ -0.48
LSS-201ENST00000356396 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 SLC22A20A6NK97 555 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 NOS1APO75052 506 aaPredicted RBP12.07□□□□□ -0.48
LSS-201ENST00000356396 RAB3AP20336 220 aa12.07□□□□□ -0.48
LSS-201ENST00000356396 SF3B4Q15427 424 aaKnown RBP eCLIP12.07□□□□□ -0.484e-7■■■■■ 28
LSS-201ENST00000356396 GLT8D1Q68CQ7 371 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms