RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ALDH3B1P43353 468 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 NPY4RP50391 375 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 HSF1Q00613 529 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 SMCO1Q147U7 214 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 SLC9A3R2Q15599 337 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 COX15Q7KZN9 410 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 SLC29A4Q7RTT9 530 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 OR5AS1Q8N127 324 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 METTL27Q8N6F8 245 aaPredicted RBP10.12□□□□□ -0.79
CAPN9-202ENST00000354537 C11orf40Q8WZ69 217 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 NICN1Q9BSH3 213 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 MTIF3Q9H2K0 278 aaKnown RBP10.12□□□□□ -0.79
CAPN9-202ENST00000354537 SEBOXQ9HB31 216 aaPredicted RBP10.12□□□□□ -0.79
CAPN9-202ENST00000354537 CHST11Q9NPF2 352 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 B3GALT5Q9Y2C3 310 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
CAPN9-202ENST00000354537 MYO7AQ13402 2215 aa10.12□□□□□ -0.79
CAPN9-202ENST00000354537 ARHGEF17Q96PE2 2063 aaPredicted RBP10.11□□□□□ -0.79
CAPN9-202ENST00000354537 ANKUB1A6NFN9 424 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 IGHV4-34P06331 123 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 LAP3P28838 519 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 VEGFBP49765 207 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 TMEM50BP56557 158 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 SQSTM1Q13501 440 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 AADACL3Q5VUY0 350 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 RPL7L1Q6DKI1 246 aaKnown RBP10.11□□□□□ -0.79
CAPN9-202ENST00000354537 OR2I1PQ8NGU4 316 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 OR13G1Q8NGZ3 307 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 SNIP1Q8TAD8 396 aaKnown RBP10.11□□□□□ -0.79
CAPN9-202ENST00000354537 TMEM41AQ96HV5 264 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 TMEM59Q9BXS4 323 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 OR11A1Q9GZK7 315 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 RAB33BQ9H082 229 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 ARV1Q9H2C2 271 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 OR2S2Q9NQN1 319 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 CUTCQ9NTM9 273 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 C1orf123Q9NWV4 160 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 METTL1Q9UBP6 276 aaKnown RBP10.11□□□□□ -0.79
CAPN9-202ENST00000354537 COPS7AQ9UBW8 275 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 SUSD2Q9UGT4 822 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 TUBD1Q9UJT1 453 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 STARD10Q9Y365 291 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 KIF26BQ2KJY2 2108 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 A0A1W2PNV4 684 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 TLCD2A6NGC4 264 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 WISP1O95388 367 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 MPIG6BO95866 241 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 AMY2BP19961 511 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 OR3A2P47893 321 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 P2RY4P51582 365 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 FMODQ06828 376 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 THEM4Q5T1C6 240 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 KIAA0895LQ68EN5 471 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 OR1N1Q8NGS0 311 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 C2CD4CQ8TF44 421 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 SSC4DQ8WTU2 575 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 ROBO4Q8WZ75 1007 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 TSLPQ969D9 159 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 HIST1H2BAQ96A08 127 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 GAS2L1Q99501 681 aaPredicted RBP10.11□□□□□ -0.79
CAPN9-202ENST00000354537 PLEKHA2Q9HB19 425 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 EDARQ9UNE0 448 aa10.11□□□□□ -0.79
CAPN9-202ENST00000354537 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 FOXI3A8MTJ6 420 aaPredicted RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 B4DGG1 531 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 ADAM10O14672 748 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 SOCS1O15524 211 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 RRP8O43159 456 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 GMFGO60234 142 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 THEGLP0DJG4 465 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 MYOGP15173 224 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 SMAD2Q15796 467 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 EIF2S3LQ2VIR3 472 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 DHRS11Q6UWP2 260 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 UBAC2Q8NBM4 344 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 OR10S1Q8NGN2 331 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 TCEAL3Q969E4 200 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 MALSU1Q96EH3 234 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 TGM7Q96PF1 710 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 CRB3Q9BUF7 120 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 ZNF878C9JN71 531 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 ETV2O00321 342 aaPredicted RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 IFNA2P01563 188 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 IGLV3-19P01714 112 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 ZNF708P17019 499 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 RPL12P30050 165 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 CD80P33681 288 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 SUCLG1P53597 346 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 ZNF542PQ5EBM4 170 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 DOK3Q7L591 496 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 ADPRHL1Q8NDY3 354 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 TMEM104Q8NE00 496 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 DDIT4LQ96D03 193 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 DNAJA3Q96EY1 480 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 MRPL13Q9BYD1 178 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 FOXQ1Q9C009 403 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 OR10A2Q9H208 303 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 FAM212BQ9NTI7 297 aaPredicted RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 SOHLH2Q9NX45 425 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms