RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 UBL3O95164 117 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MT-ND5P03915 603 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 CRYBA1P05813 215 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 PATE4P0C8F1 98 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 NR2F1P10589 423 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ARSBP15848 533 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MAKP20794 623 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ATP6V1B2P21281 511 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MTNR1AP48039 350 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MRPL19P49406 292 aaKnown RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 AKR1D1P51857 326 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ERVS71-1P61550 626 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 NCS1P62166 190 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 CD47Q08722 323 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 RBBP4Q09028 425 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ZNF154Q13106 437 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 CAMK2DQ13557 499 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 COTL1Q14019 142 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 TRAM2Q15035 370 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 GUCA2BQ16661 112 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 FBLN7Q53RD9 439 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 XKR7Q5GH72 579 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 DLEU7Q6UYE1 221 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ZNF836Q6ZNA1 936 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 VRK2Q86Y07 508 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 TMEM123Q8N131 208 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MIER2Q8N344 545 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 OR6N1Q8NGY5 312 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MFSD8Q8NHS3 518 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ELMOD3Q96FG2 381 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 NEU1Q99519 415 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MARVELD1Q9BSK0 173 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 EMC6Q9BV81 110 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ULBP2Q9BZM5 246 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MIXL1Q9H2W2 232 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 OPA3Q9H6K4 179 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 CDH20Q9HBT6 801 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 ACOT13Q9NPJ3 140 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MMP26Q9NRE1 261 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 C19orf12Q9NSK7 152 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SDHAF2Q9NX18 166 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SLCO1C1Q9NYB5 712 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 MLXQ9UH92 298 aa9.48□□□□□ -0.89
RTN3-204ENST00000354497 SAMHD1Q9Y3Z3 626 aaKnown RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 SOX21Q9Y651 276 aaPredicted RBP9.48□□□□□ -0.89
RTN3-204ENST00000354497 RYR3Q15413 4870 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 A0A096LPI6 279 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 MDFIC2A0A1B0GVS7 189 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 FTCDNL1E5RQL4 147 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 CLDN34H7C241 214 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 M0R082 166 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 AIPO00170 330 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 SPRY3O43610 288 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 IFNA10P01566 189 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 C1QCP02747 245 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 OR8G3PP0DMU2 310 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 CCL2P13500 99 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 RAG2P55895 527 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 CD81P60033 236 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 PUDPQ08623 228 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 TBCEQ15813 527 aaPredicted RBP9.47□□□□□ -0.89
RTN3-204ENST00000354497 LAIR2Q6ISS4 152 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 GDPGP1Q6ZNW5 385 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 SHFQ7M4L6 423 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 UEVLDQ8IX04 471 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 SKA3Q8IX90 412 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 C20orf196Q8IYI0 205 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 UXS1Q8NBZ7 420 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 C11orf65Q8NCR3 313 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 OR4F5Q8NH21 305 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 RNASE11Q8TAA1 199 aaKnown RBP9.47□□□□□ -0.89
RTN3-204ENST00000354497 ZNF417Q8TAU3 575 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 STK35Q8TDR2 534 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 C11orf40Q8WZ69 217 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 ST8SIA2Q92186 375 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 NEURL3Q96EH8 262 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 KTI12Q96EK9 354 aaPredicted RBP9.47□□□□□ -0.89
RTN3-204ENST00000354497 ZNF75AQ96N20 296 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 NEDD4LQ96PU5 975 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 TRNT1Q96Q11 434 aaKnown RBP9.47□□□□□ -0.89
RTN3-204ENST00000354497 ZNF587Q96SQ5 575 aaPredicted RBP9.47□□□□□ -0.89
RTN3-204ENST00000354497 RBM4BQ9BQ04 359 aaKnown RBP9.47□□□□□ -0.89
RTN3-204ENST00000354497 SRRQ9GZT4 340 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 PCDHAC1Q9H158 963 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 ZCCHC4Q9H5U6 513 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 MTHFD2LQ9H903 347 aaPredicted RBP9.47□□□□□ -0.89
RTN3-204ENST00000354497 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 B3GAT1Q9P2W7 334 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 FBXL3Q9UKT7 428 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 MMP24Q9Y5R2 645 aa9.47□□□□□ -0.89
RTN3-204ENST00000354497 KMT2CQ8NEZ4 4911 aaKnown RBP9.46□□□□□ -0.89
RTN3-204ENST00000354497 A0A0G2JPF8 293 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 A0A1B0GUS0 222 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 A0A1B0GW55 424 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 ACOD1A6NK06 481 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 HNRNPCL3B7ZW38 293 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 SLC31A2O15432 143 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 HOXA3O43365 443 aaPredicted RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 TRAF3IP2O43734 574 aaPredicted RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 ORC5O43913 435 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms