RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 VAPBO95292 243 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 TNFAIP8O95379 198 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 GIPP09681 153 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR5H8P0DN80 308 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ANOS1P23352 680 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 IVDP26440 423 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 HRH1P35367 487 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 GGT2P36268 569 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 KIR3DL2P43630 455 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 UCNP55089 124 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 GPNMBQ14956 572 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 SF3A2Q15428 464 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 C5orf64Q2M2E5 130 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ACTL10Q5JWF8 245 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 EOGTQ5NDL2 527 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 PRMT9Q6P2P2 845 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 SPESP1Q6UW49 350 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 PNKDQ8N490 385 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ATPAF2Q8N5M1 289 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 DNAJC19Q96DA6 116 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 SGTBQ96EQ0 304 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ADTRPQ96IZ2 230 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF514Q96K75 400 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR5M11Q96RB7 305 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF184Q99676 751 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ARHGDIGQ99819 225 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 C20orf144Q9BQM9 153 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 NDEL1Q9GZM8 345 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 PLEKHA1Q9HB21 404 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 MTRF1LQ9UGC7 380 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 KLK13Q9UKR3 277 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 KLF12Q9Y4X4 402 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 FANCMQ8IYD8 2048 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 SCN2AQ99250 2005 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OTOGQ6ZRI0 2925 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 RAD51CO43502 376 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 TRAPPC6AO75865 159 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 APOA1P02647 267 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 WARSP23381 471 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CD70P32970 193 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CSKP41240 450 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 HNRNPA3P51991 378 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 UGT2B15P54855 530 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ELAVL2Q12926 359 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 UNC119Q13432 240 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 AQP6Q13520 282 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 DGCR6Q14129 220 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 PON3Q15166 354 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR7A5Q15622 319 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 FAM19A1Q7Z5A9 133 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 HSD17B13Q7Z5P4 300 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 MRPL55Q7Z7F7 128 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ST13P4Q8IZP2 240 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 LRRC52Q8N7C0 313 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 SNX31Q8N9S9 440 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR52E2Q8NGJ4 325 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR51G1Q8NGK1 321 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR2L8Q8NGY9 312 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 NAF1Q96HR8 494 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 C9orf72Q96LT7 481 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OPRPNQ99935 248 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 NSRP1Q9H0G5 558 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 VCX3BQ9H321 246 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CD209Q9NNX6 404 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 PAK5Q9P286 719 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CD300AQ9UGN4 299 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 APOBEC3BQ9UH17 382 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 TRAPPC4Q9Y296 219 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 PRG3Q9Y2Y8 225 aaPredicted RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 MOB4Q9Y3A3 225 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 USH1CQ9Y6N9 552 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 URGCP-MRPS24S4R325 110 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 KTN1Q86UP2 1357 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 NUP153P49790 1475 aaKnown RBP1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC171Q6TFL3 1326 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 ARFGEF2Q9Y6D5 1785 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 GSTTP1A0A1W2PQM5 241 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 A0A1W2PRD5 423 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 E7EWF7 191 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 hCG_2039718K7EN88 272 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 COCHO43405 550 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 SMIM24O75264 130 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CST4P01036 141 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 RPN2P04844 631 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 GKN3PP0CG01 181 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 BTDP43251 543 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 FABP6P51161 128 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 MS4A2Q01362 244 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CD47Q08722 323 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 STK38Q15208 465 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 PRR4Q16378 134 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 C1orf146Q5VVC0 180 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OLFML2AQ68BL7 652 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 TMIGD1Q6UXZ0 262 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 IL34Q6ZMJ4 242 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 C18orf65Q6ZTR6 163 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 OR2W3Q7Z3T1 314 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 STPG2Q8N412 459 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 CD177Q8N6Q3 437 aa1.2□□□□□ -2.22
BRCA1-202ENST00000354071 C20orf203Q8NBC4 194 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms