RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ICMTO60725 284 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 KRASP01116 189 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 GYPAP02724 150 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 NME1P15531 152 aaKnown RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 UBALD2Q8IYN6 164 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 OR52B4Q8NGK2 314 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 LILRB4Q8NHJ6 448 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 PTPMT1Q8WUK0 201 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 FIZ1Q96SL8 496 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 ISG20L2Q9H9L3 353 aaKnown RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 ST3GAL6Q9Y274 331 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 MBP02144 154 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 PIGPP57054 158 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 FCN2Q15485 313 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 SPRED1Q7Z699 444 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 LSMEM2Q8N112 164 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 ZPBPQ9BS86 351 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 A4GALTQ9NPC4 353 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 CBR3O75828 277 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 NTN1O95631 604 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 AGBL4Q5VU57 503 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 OR2T2Q6IF00 324 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 OR1B1Q8NGR6 318 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 BTF3L4Q96K17 158 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 PBOV1Q9GZY1 135 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 FABP4P15090 132 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 ORM2P19652 201 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 CST5P28325 142 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 CEACAM6P40199 344 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 TCTN1Q2MV58 587 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 PLK5Q496M5 336 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 TMUB2Q71RG4 321 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 MS4A6EQ96DS6 147 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 ADGRL4Q9HBW9 690 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 OR1A1Q9P1Q5 309 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 DDX60Q8IY21 1712 aaKnown RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 MMP11P24347 488 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 METAP1P53582 386 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 FABP9Q0Z7S8 132 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 FOXF1Q12946 379 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 SPRED3Q2MJR0 410 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 CEACAM16Q2WEN9 425 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 THEM4Q5T1C6 240 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 UBE3DQ7Z6J8 389 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 OR52I2Q8NH67 350 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 DYNLRB2Q8TF09 96 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 FCRL1Q96LA6 429 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 RPP25Q9BUL9 199 aaKnown RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 ZNF768Q9H5H4 540 aaKnown RBP9.03□□□□□ -0.96
COL11A1-201ENST00000353414 FBXL4Q9UKA2 621 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 IGHV3OR15-7A0A075B7D8 119 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 G3V3Q6 166 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 MGPP08493 103 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 TRAPPC2P0DI81 140 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 TRAPPC2BP0DI82 140 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 SOX8P57073 446 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 LYZP61626 148 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 LIPNQ5VXI9 398 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 SLC25A32Q9H2D1 315 aa9.03□□□□□ -0.96
COL11A1-201ENST00000353414 IGKV3D-11A0A0A0MRZ8 115 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 FCGR3BO75015 233 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.96
COL11A1-201ENST00000353414 IGKV3-11P04433 115 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 PMCHP20382 165 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 ZNF141Q15928 474 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 SP6Q3SY56 376 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 OR6K3Q8NGY3 331 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 SLC35B4Q969S0 331 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 DUS3LQ96G46 650 aaKnown RBP9.02□□□□□ -0.96
COL11A1-201ENST00000353414 PECRQ9BY49 303 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 UBQLN3Q9H347 655 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 PPIL1Q9Y3C6 166 aa9.02□□□□□ -0.96
COL11A1-201ENST00000353414 G6PCP35575 357 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 TGFBR1P36897 503 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 IHHQ14623 411 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 TRIP6Q15654 476 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 CA13Q8N1Q1 262 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 SDF2Q99470 211 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 DFFBO76075 338 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 TCRBP04435 133 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 MPLP40238 635 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 RFX2P48378 723 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 RAB1AP62820 205 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 OR2F1Q13607 317 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 COMMD1Q8N668 190 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 TAAR9Q96RI9 348 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 NDRG4Q9ULP0 352 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF716A6NP11 495 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 SLC25A5P05141 298 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 BPIFB3P59826 476 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 SLC38A9Q8NBW4 561 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 RBPMSQ93062 196 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 NEURL3Q96EH8 262 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 OR2M2Q96R28 347 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms