RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 LINC00346Q8IVM7 164 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 ELMOD2Q8IZ81 293 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 ZIC4Q8N9L1 334 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 OR2AJ1Q8NGZ0 328 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 LINC01560Q8TB33 94 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 HPS1Q92902 700 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 ORAI1Q96D31 301 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 JSRP1Q96MG2 331 aaPredicted RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 MARVELD1Q9BSK0 173 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 HDHD2Q9H0R4 259 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 PNRC2Q9NPJ4 139 aaKnown RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 DEPPQ9NTK1 212 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 DDX28Q9NUL7 540 aaKnown RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 COPZ2Q9P299 210 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 FBXL3Q9UKT7 428 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 RBMX2Q9Y388 322 aaKnown RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 FLVCR1Q9Y5Y0 555 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 CACNG2Q9Y698 323 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 DYSFO75923 2080 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 A0A0A6YYH2 397 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 LOC100289279A0A1B0GTE1 492 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 NAP1L6A6NFF2 107 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 A6NJ64 397 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 CENPXA8MT69 81 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 G3V3Y1 287 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 GABARAPH6UMI1 98 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ACOT7O00154 380 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 TNFSF11O14788 317 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 SMAD9O15198 467 aaKnown RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 LANCL1O43813 399 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ORC5O43913 435 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ECDO95905 644 aaPredicted RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 TTRP02766 147 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 OPN1LWP04000 364 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 MAS1P04201 325 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 HPNP05981 417 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ACSM4P0C7M7 580 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 MSR1P21757 451 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 CCL1P22362 96 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ENPP1P22413 925 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 DDOSTP39656 456 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 RAG2P55895 527 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 GFRA1P56159 465 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 TPTEP56180 551 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 AP3S2P59780 193 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 DGCR2P98153 550 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 KLF9Q13886 244 aaPredicted RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 STK11Q15831 433 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 RAB11BQ15907 218 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 OTPQ5XKR4 325 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ASPHD2Q6ICH7 369 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ZNF529Q6P280 563 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ANKRD16Q6P6B7 361 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 CFAP77Q6ZQR2 320 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 Q6ZSR3 168 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 FCRLAQ7L513 359 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 LYPD6Q86Y78 171 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 C20orf196Q8IYI0 205 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 TOMM5Q8N4H5 51 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 CCDC54Q8NEL0 328 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 OR2M7Q8NG81 312 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 OR6M1Q8NGM8 313 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 OR13C3Q8NGS6 347 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 OR2V1Q8NHB1 315 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 OR14L1PQ8NHC6 308 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 SYNPRQ8TBG9 265 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 IGFBPL1Q8WX77 278 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 CPNE4Q96A23 557 aaPredicted RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 PTX4Q96A99 478 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 NABP1Q96AH0 204 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 TMEM45BQ96B21 275 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 FOXRED1Q96CU9 486 aaPredicted RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 S100A16Q96FQ6 103 aaKnown RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 SFXN2Q96NB2 322 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ZNF385AQ96PM9 386 aaKnown RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 UTP23Q9BRU9 249 aaKnown RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 SRXN1Q9BYN0 137 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 GSX2Q9BZM3 304 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 MMP28Q9H239 520 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 NELFAQ9H3P2 528 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 ZNF703Q9H7S9 590 aaPredicted RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 B4GALT7Q9UBV7 327 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 CDC42EP3Q9UKI2 254 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 GTF2A1LQ9UNN4 478 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 POLR1DQ9Y2S0 133 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 NCKAP5O14513 1909 aa7.16□□□□□ -1.26
CD44-205ENST00000352818 PHF3Q92576 2039 aaKnown RBP7.16□□□□□ -1.26
CD44-205ENST00000352818 IGKV3D-15A0A087WSY6 115 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 A0A0B4J293 547 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 LINC00854A0A1B0GVQ3 168 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 ZNF716A6NP11 495 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 RNF223E7ERA6 249 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 LDLRAD4O15165 306 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 DHHO43323 396 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 XRCC3O43542 346 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 CYTIPO60759 359 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 KRT33AO76009 404 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 GLSO94925 669 aaPredicted RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 APOC1P02654 83 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 SP1P08047 785 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms