RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 COL4A6Q14031 1691 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 IFNA4P05014 189 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 LPLP06858 475 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ACTBL2Q562R1 376 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 FAM185AQ8N0U4 392 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 C20orf85Q9H1P6 137 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMC6-201ENST00000351948 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ZFHX2Q9C0A1 2572 aaPredicted RBP12.2□□□□□ -0.46
SMC6-201ENST00000351948 RALGAPA2Q2PPJ7 1873 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 MED12Q93074 2177 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 RFX2P48378 723 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 CSRP3P50461 194 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 CCR9P51686 369 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 AKR1C8PQ5T2L2 129 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 OR10J5Q8NHC4 309 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ZPLD1Q8TCW7 415 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 KIRREL1Q96J84 757 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 C4orf45Q96LM5 186 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ZNF385AQ96PM9 386 aaKnown RBP12.2□□□□□ -0.46
SMC6-201ENST00000351948 TTTY12Q9BZ98 90 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 TMEM100Q9NV29 134 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 KLK11Q9UBX7 282 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 POM121CA8CG34 1229 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 AGFG2O95081 481 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 RAB35Q15286 201 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 SPAG16Q8N0X2 631 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 FBXL14Q8N1E6 418 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 TIMD4Q96H15 378 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 TMEM68Q96MH6 324 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 PSD2Q9BQI7 771 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ASF1BQ9NVP2 202 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 NECAP2Q9NVZ3 263 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ROS1P08922 2347 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 SH2D1BO14796 132 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 HACD4Q5VWC8 232 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 SHEQ5VZ18 495 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 GLCCI1Q86VQ1 547 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 ZNF2Q9BSG1 426 aaPredicted RBP12.2□□□□□ -0.46
SMC6-201ENST00000351948 RAB33BQ9H082 229 aa12.2□□□□□ -0.46
SMC6-201ENST00000351948 K7ESF4 209 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 SSX1Q16384 188 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 CTF1Q16619 201 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 CDCP2Q5VXM1 449 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 SSX9Q7RTT3 188 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 NPEPL1Q8NDH3 523 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 ASB10Q8WXI3 467 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 DOK1Q99704 481 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 FLVCR2Q9UPI3 526 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 CD3DP04234 171 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 CMBLQ96DG6 245 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 OR2M2Q96R28 347 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 POFUT1Q9H488 388 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 TREM2Q9NZC2 230 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 RNF150Q9ULK6 438 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 APOC3P02656 99 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 DCTDP32321 178 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 CD300LDQ6UXZ3 194 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 TSEN54Q7Z6J9 526 aaKnown RBP12.19□□□□□ -0.46
SMC6-201ENST00000351948 SLC38A9Q8NBW4 561 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 ISYNA1Q9NPH2 558 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 SLC52A3Q9NQ40 469 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 GCM2O75603 506 aaPredicted RBP12.19□□□□□ -0.46
SMC6-201ENST00000351948 ATF1P18846 271 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 SNCAP37840 140 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
SMC6-201ENST00000351948 HIKESHIQ53FT3 197 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 RNLSQ5VYX0 342 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 TFAP2EQ6VUC0 442 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 TMEM217Q8N7C4 229 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
SMC6-201ENST00000351948 PATJQ8NI35 1801 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 A0A0J9YW62 118 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 CSF3P09919 207 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 RNF128Q8TEB7 428 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 KCNE5Q9UJ90 142 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 GMEB1Q9Y692 573 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 IAH1Q2TAA2 248 aaPredicted RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 OR6X1Q8NH79 312 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 TCTEX1D2Q8WW35 142 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 SPSB2Q99619 263 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 KCNK15Q9H427 330 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 EVX1P49640 407 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 F2RL1P55085 397 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 ACSM1Q08AH1 577 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 OR4S1Q8NGB4 309 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 ESRP2Q9H6T0 727 aaKnown RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 PRMT8Q9NR22 394 aaPredicted RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 MRM2Q9UI43 246 aaKnown RBP12.18□□□□□ -0.46
SMC6-201ENST00000351948 CHD5Q8TDI0 1954 aa12.18□□□□□ -0.46
SMC6-201ENST00000351948 TRIM64BA6NI03 449 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms