RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SRP19P09132 144 aaKnown RBP11.8□□□□□ -0.52
IFT88-202ENST00000351808 CST2P09228 141 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 CXCR1P25024 350 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 RND3P61587 244 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 GABREP78334 506 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 CSNK1G2P78368 415 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 CLLU1OSQ5K130 101 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 ABLIM2Q6H8Q1 611 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 DPY19L2P2Q6ZN68 376 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 TMEM182Q6ZP80 229 aaPredicted RBP11.8□□□□□ -0.52
IFT88-202ENST00000351808 CDC20BQ86Y33 519 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 FAM185AQ8N0U4 392 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 CYB561D1Q8N8Q1 229 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 OR2I1PQ8NGU4 316 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 SVIPQ8NHG7 77 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 FIBINQ8TAL6 211 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 METTL21AQ8WXB1 218 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 URM1Q9BTM9 101 aaKnown RBP11.8□□□□□ -0.52
IFT88-202ENST00000351808 ARV1Q9H2C2 271 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 WDR76Q9H967 626 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 CHST11Q9NPF2 352 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 MEMO1Q9Y316 297 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 V9GYS6 101 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 H7C1C5 153 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 M0QZK8 103 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
IFT88-202ENST00000351808 HMGA1P17096 107 aaKnown RBP11.8□□□□□ -0.52
IFT88-202ENST00000351808 LCN6P62502 163 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 EGR3Q06889 387 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 OR5I1Q13606 314 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 TMEM184AQ6ZMB5 413 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 RABEPKQ7Z6M1 372 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 OR4N5Q8IXE1 308 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 SMARCD2Q92925 531 aa11.8□□□□□ -0.52
IFT88-202ENST00000351808 A0A0A6YYH2 397 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 A6NJ64 397 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 ZNF264O43296 627 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 SCGB1D2O95969 90 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 BATFQ16520 125 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 FBXW9Q5XUX1 488 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 SLC35D2Q76EJ3 337 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 LFNGQ8NES3 379 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 TAAR8Q969N4 342 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 NIPSNAP3BQ9BS92 247 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 DHDHQ9UQ10 334 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 RFNGQ9Y644 331 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 CLEC3AO75596 197 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 SCGNO76038 276 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 FGF5P12034 268 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 GLRA1P23415 457 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 PPM1AP35813 382 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 H3F3AP84243 136 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 COL10A1Q03692 680 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 MAP2K5Q13163 448 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 SQSTM1Q13501 440 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 PCK2Q16822 640 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 DCST2Q5T1A1 773 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 OR4D6Q8NGJ1 314 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 LPAR4Q99677 370 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 RTBDNQ9BSG5 229 aaPredicted RBP11.79□□□□□ -0.52
IFT88-202ENST00000351808 ABHD14AQ9BUJ0 271 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 SRPK3Q9UPE1 567 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
IFT88-202ENST00000351808 LIPGQ9Y5X9 500 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 KIF26BQ2KJY2 2108 aa11.79□□□□□ -0.52
IFT88-202ENST00000351808 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 A0A1B0GW64 132 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 XKRY2A2RUG3 117 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 K7ESM1 405 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 SOX1O00570 391 aaPredicted RBP11.78□□□□□ -0.52
IFT88-202ENST00000351808 XKRYO14609 159 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 DEDDO75618 318 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 AGR2O95994 175 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ALOX5APP20292 161 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 RPS4Y1P22090 263 aaKnown RBP11.78□□□□□ -0.52
IFT88-202ENST00000351808 FLT3LGP49771 235 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 POLR2HP52434 150 aaKnown RBP11.78□□□□□ -0.52
IFT88-202ENST00000351808 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ZNF880Q6PDB4 577 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 PLXDC2Q6UX71 529 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ZNF547Q8IVP9 402 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 MS4A6EQ96DS6 147 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 SLC25A44Q96H78 314 aaPredicted RBP11.78□□□□□ -0.52
IFT88-202ENST00000351808 ZNF558Q96NG5 402 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ELOVL1Q9BW60 279 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 PARD6AQ9NPB6 346 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 CKLFQ9UBR5 152 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 MYOFQ9NZM1 2061 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 PLXNA2O75051 1894 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 USP34Q70CQ2 3546 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 FANCMQ8IYD8 2048 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ARPC3O15145 178 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 ZNF217O75362 1048 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 PNPP00491 289 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 BRS3P32247 399 aa11.78□□□□□ -0.52
IFT88-202ENST00000351808 SUCLG1P53597 346 aaKnown RBP11.78□□□□□ -0.52
IFT88-202ENST00000351808 TRMT12Q53H54 448 aaKnown RBP11.78□□□□□ -0.52
IFT88-202ENST00000351808 C1orf194Q5T5A4 169 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms