RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PLEKHA6Q9Y2H5 1048 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 AKAP13Q12802 2813 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ZFHX3Q15911 3703 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 IGKV1-27A0A075B6S5 117 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 FOXI3A8MTJ6 420 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 F12P00748 615 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 CD8AP01732 235 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 RFPL3SP0C7P2 107 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ADCYAP1P18509 176 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF93P35789 620 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 RBMXP38159 391 aaKnown RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 LUMP51884 338 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 H3F3AP84243 136 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SPEM2Q0P670 501 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 Q0VFX4 171 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ENDOGQ14249 297 aaKnown RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ANKRD55Q3KP44 614 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 DRAM2Q6UX65 266 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 KCTD9Q7L273 389 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SLC25A42Q86VD7 318 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 CDH26Q8IXH8 852 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 BVESQ8NE79 360 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 OR52H1Q8NGJ2 320 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 NUBPLQ8TB37 319 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ELP5Q8TE02 316 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ST8SIA1Q92185 356 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 FBXO17Q96EF6 278 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 OR10C1Q96KK4 312 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ALX4Q9H161 411 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 GPN1Q9HCN4 374 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SLC17A5Q9NRA2 495 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 CRIM1Q9NZV1 1036 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 TNFSF18Q9UNG2 199 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 TACC2O95359 2948 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 A0A1W2PNV4 684 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 DBX1A6NMT0 343 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 EEF1E1-BLOC1S5C9J1V9 151 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 SULT2B1O00204 365 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF208O43345 1280 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CDC14BO60729 498 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CYB5AP00167 134 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 GLRA1P23415 457 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ACKR3P25106 362 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CX3CR1P49238 355 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CLDN15P56746 228 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 DCDP81605 110 aaKnown RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 RELQ04864 619 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ODF1Q14990 250 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 IGFBP7Q16270 282 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 HLA-BQ31612 363 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 SLC25A53Q5H9E4 307 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 AWAT2Q6E213 333 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 C11orf88Q6PI97 169 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CLEC9AQ6UXN8 241 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 C20orf196Q8IYI0 205 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF454Q8N9F8 522 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 FADS6Q8N9I5 356 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 NOXO1Q8NFA2 376 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OR10R2Q8NGX6 335 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OR6K3Q8NGY3 331 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OR14K1Q8NGZ2 314 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OR2AE1Q8NHA4 323 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OIT3Q8WWZ8 545 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ST8SIA2Q92186 375 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CRB3Q9BUF7 120 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ALKBH4Q9NXW9 302 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OR5AC2Q9NZP5 309 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 KIF25Q9UIL4 384 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CDV3Q9UKY7 258 aaKnown RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 MED13Q9UHV7 2174 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 FAM74A7A6NL05 159 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 STK17BO94768 372 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 PMS2P2O95744 297 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 MPIG6BO95866 241 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 WDPCPO95876 746 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 IL2RAP01589 272 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 RPS2P15880 293 aaKnown RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 RPA2P15927 270 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 FAHP16930 419 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 EPHA8P29322 1005 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CLDN17P56750 224 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 MAJINQ3KP22 176 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 FAM74A3Q4VXF1 159 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM105Q8N8V8 129 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ZSCAN4Q8NAM6 433 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 NAXEQ8NCW5 288 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OR13G1Q8NGZ3 307 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 OR51F2Q8NH61 342 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 SCARB1Q8WTV0 552 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ZBTB8AQ96BR9 441 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 DDIT4LQ96D03 193 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 METTL7AQ9H8H3 244 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CYTL1Q9NRR1 136 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 MCTS1Q9ULC4 181 aaKnown RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 HSPB2A8KAH6 182 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 F5H5K5 113 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 RP2O75695 350 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CD2P06729 351 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 HSD11B1P28845 292 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms