RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 GPNMBQ14956 572 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 YIF1BQ5BJH7 314 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 SFRP5Q5T4F7 317 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 DCXRQ7Z4W1 244 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 SDSLQ96GA7 329 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
CLCN6-202ENST00000346436 C1RLQ9NZP8 487 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF638Q14966 1978 aaKnown RBP9.77□□□□□ -0.85
CLCN6-202ENST00000346436 CTSVO60911 334 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 GPANK1O95872 356 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 SLC2A1P11166 492 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 ATF1P18846 271 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 HTR2AP28223 471 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 EXOSC2Q13868 293 aaKnown RBP9.77□□□□□ -0.85
CLCN6-202ENST00000346436 OR52W1Q6IF63 320 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 MOB3BQ86TA1 216 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 C17orf78Q8N4C9 275 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 FAM3DQ96BQ1 224 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 PTDSS2Q9BVG9 487 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 HEXA-AS1Q9H8Q6 139 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 LSM5Q9Y4Y9 91 aaKnown RBP9.77□□□□□ -0.85
CLCN6-202ENST00000346436 CCDC88CQ9P219 2028 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 NYNRINQ9P2P1 1898 aaKnown RBP9.77□□□□□ -0.85
CLCN6-202ENST00000346436 IGHV5-10-1A0A0J9YXX1 117 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 EFSO43281 561 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 M6PRP20645 277 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 HTR2CP28335 458 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 TAS2R19P59542 299 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 CDK5R1Q15078 307 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 CEACAM16Q2WEN9 425 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 VMA21Q3ZAQ7 101 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 OR2AK2Q8NG84 335 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 RAB3CQ96E17 227 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 LRFN5Q96NI6 719 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 PIMREGQ9BSJ6 248 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 ISYNA1Q9NPH2 558 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF236Q9UL36 1845 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 GREM1O60565 184 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 EPXP11678 715 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 S100A2P29034 98 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 ECI1P42126 302 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 GPR6P46095 362 aaPredicted RBP9.77□□□□□ -0.85
CLCN6-202ENST00000346436 RTP5Q14D33 572 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF680Q8NEM1 530 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 OR2Z1Q8NG97 314 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 NANPQ8TBE9 248 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 RBPMSQ93062 196 aaKnown RBP9.77□□□□□ -0.85
CLCN6-202ENST00000346436 COMMD5Q9GZQ3 224 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 GAL3ST2Q9H3Q3 398 aa9.77□□□□□ -0.85
CLCN6-202ENST00000346436 PDCD11Q14690 1871 aaKnown RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 A0A1B0GTH9 108 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 TMEM8BA6NDV4 472 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 TERTO14746 1132 aaKnown RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 TPPPO94811 219 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 C21orf58P58505 322 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 RAB1AP62820 205 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 FOXF1Q12946 379 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 RNLSQ5VYX0 342 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 TIGD3Q6B0B8 471 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 CCL17Q92583 94 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 SMIM19Q96E16 107 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 LRRC3BQ96PB8 259 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 UHRF2Q96PU4 802 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 EIF5A2Q9GZV4 153 aaKnown RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 PRDM6Q9NQX0 595 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 COA3Q9Y2R0 106 aaPredicted RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 TRAV38-1A0A0B4J264 116 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 RAF1P04049 648 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 GAAP10253 952 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 BLVRBP30043 206 aaPredicted RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 ERHP84090 104 aaKnown RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF658BQ4V348 819 aaPredicted RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 OR10K2Q6IF99 312 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 SLC16A9Q7RTY1 509 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 NUP37Q8NFH4 326 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 OR10J5Q8NHC4 309 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 WDFY2Q96P53 400 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 PPA2Q9H2U2 334 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 PILRBQ9UKJ0 227 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 SLC22A13Q9Y226 551 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 WNT1P04628 370 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 HOXB5P09067 269 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 POU3F3P20264 500 aaPredicted RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 ACHEP22303 614 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 CORO6Q6QEF8 472 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 CATSPERDQ86XM0 798 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 POFUT1Q9H488 388 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 PRR19A6NJB7 356 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 PLA2G10O15496 165 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 SEMG1P04279 462 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF93P35789 620 aaPredicted RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 TSEN54Q7Z6J9 526 aaKnown RBP9.76□□□□□ -0.85
CLCN6-202ENST00000346436 PIGTQ969N2 578 aa9.76□□□□□ -0.85
CLCN6-202ENST00000346436 FADS1O60427 444 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 PTBP1P26599 531 aaKnown RBP eCLIP9.75□□□□□ -0.854e-7■■■■■ 32.6
CLCN6-202ENST00000346436 DIO1P49895 249 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 GUCA2AQ02747 115 aa9.75□□□□□ -0.85
CLCN6-202ENST00000346436 Q6ZTK2 550 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms