RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PCBP3P57721 371 aaKnown RBP10.93□□□□□ -0.66
COL12A1-202ENST00000345356 KIAA0895LQ68EN5 471 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 GJC3Q8NFK1 279 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 NTNG2Q96CW9 530 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 SHARPINQ9H0F6 387 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 RARRES3Q9UL19 164 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 LIPGQ9Y5X9 500 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 TRBV11-1A0A0K0K1C0 115 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 OR2J2O76002 312 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 AKR7A3O95154 331 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 DDTP30046 118 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 DEFB115Q30KQ5 88 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF385CQ66K41 422 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-202ENST00000345356 CCDC74AQ96AQ1 378 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 ARRDC3Q96B67 414 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 PBOV1Q9GZY1 135 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 HIF1ANQ9NWT6 349 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 KIR2DS5A0A0G2JLQ3 304 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 A0A0G2JNG1 304 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 PRSS37A4D1T9 235 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 AQP7P3A6NL99 342 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF814B7Z6K7 855 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 KIR2DS3K7RE56 304 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 UBE2G1P62253 170 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 SKP2Q13309 424 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 KIR2DS5Q14953 304 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 NRIP2Q9BQI9 281 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 PITPNC1Q9UKF7 332 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 DAPP1Q9UN19 280 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 SIGLEC7Q9Y286 467 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 CNTRLQ7Z7A1 2325 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 TRBV5-4A0A0C4DH59 114 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 SLC31A2O15432 143 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 CTXN2P0C2S0 81 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 OTX2P32243 289 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 PWWP2BQ6NUJ5 590 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 Q6ZSR6 202 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 ARHGEF39Q8N4T4 335 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 PPP1R3CQ9UQK1 317 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 SLC25A6P12236 298 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 CHRNA7P36544 502 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 LDLRAD3Q86YD5 345 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 OR10A7Q8NGE5 316 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 KIAA1324LA8MWY0 1029 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 EDN3P14138 238 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 OR10J1P30954 320 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 OR11H4Q8NGC9 324 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 MRPS24Q96EL2 167 aaKnown RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 CCNL2Q96S94 520 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 TMEM184BQ9Y519 407 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 RICTORQ6R327 1708 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 EMDP50402 254 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 SCAND1P57086 179 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 ERVFC1-1P60608 527 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 B2MP61769 119 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 TMEM164Q5U3C3 297 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF660Q6AZW8 331 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 MISPQ8IVT2 679 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 OR5C1Q8NGR4 320 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 NXPE3Q969Y0 559 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 CNRIP1Q96F85 164 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 OBP2BQ9NPH6 170 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 DMRT1Q9Y5R6 373 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 CACNA1SQ13698 1873 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 DHODHQ02127 395 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 PNRC1Q12796 327 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 DMKNQ6E0U4 476 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-202ENST00000345356 PIK3IP1Q96FE7 263 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 NMES1Q9C002 83 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 Q9N2K0 584 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 C20orf141Q9NUB4 165 aa10.92□□□□□ -0.66
COL12A1-202ENST00000345356 UBE2L5PA0A1B0GUS4 154 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF17P17021 662 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 IL10RAQ13651 578 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 ADAMTSL4Q6UY14 1074 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 Q7L0L9 218 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 GRINAQ7Z429 371 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 OR2AE1Q8NHA4 323 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 LYRM4Q9HD34 91 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 NAT8BQ9UHF3 227 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 AKAP11Q9UKA4 1901 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 K7ESM1 405 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 FGF17O60258 216 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 SEMA4FO95754 770 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 IGFBP6P24592 240 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-202ENST00000345356 TIAL1Q01085 375 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL12A1-202ENST00000345356 WDR38Q5JTN6 314 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 FAM78BQ5VT40 261 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 C10orf111Q8N326 155 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 PINX1Q96BK5 328 aaKnown RBP10.91□□□□□ -0.66
COL12A1-202ENST00000345356 CACNA1CQ13936 2221 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 ARID1AO14497 2285 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 HS3ST1O14792 307 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 HYAL3O43820 417 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-202ENST00000345356 GUSBP08236 651 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 MUC1P15941 1255 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-202ENST00000345356 IRS1P35568 1242 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF345Q14585 488 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 DMRTC1Q5HYR2 192 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms