RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CTSAP10619 480 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 IRF1P10914 325 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 LMO1P25800 156 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 PBLDP30039 288 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 GDI1P31150 447 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ECI1P42126 302 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 NPY4RP50391 375 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 IDH3GP51553 393 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 RND2P52198 227 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 PRPS1P60891 318 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FAM189A2Q15884 450 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 VAX1Q5SQQ9 334 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 C1orf194Q5T5A4 169 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 GFI1BQ5VTD9 330 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 SLC48A1Q6P1K1 146 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 TMPPEQ6ZT21 453 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 SPRED2Q7Z698 418 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FOXRED2Q8IWF2 684 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 RAB42Q8N4Z0 105 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ADAD2Q8NCV1 583 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 NAXEQ8NCW5 288 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 NPEPL1Q8NDH3 523 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 SLC24A4Q8NFF2 622 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 OR10G4Q8NGN3 311 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 FRZBQ92765 325 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 TNFRSF13CQ96RJ3 184 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 INTS14Q96SY0 518 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 INSM2Q96T92 566 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ZPBPQ9BS86 351 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ALG12Q9BV10 488 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 TRIM2Q9C040 744 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 GSX1Q9H4S2 264 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 C1orf123Q9NWV4 160 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 KIAA1456Q9P272 454 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 MRM2Q9UI43 246 aaKnown RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 IKZF2Q9UKS7 526 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-201ENST00000343524 IER3IP1Q9Y5U9 82 aa7.27□□□□□ -1.25
ATG4A-201ENST00000343524 GPR179Q6PRD1 2367 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 FAM208BQ5VWN6 2430 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 YLPM1P49750 1951 aaKnown RBP7.26□□□□□ -1.25
ATG4A-201ENST00000343524 COL4A3Q01955 1670 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 A0A0B4J2E0 115 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 A0A1B0GX12 115 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF840PA6NDX5 716 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 RBFOX3A6NFN3 312 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 FCMRO60667 390 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 DEDDO75618 318 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 GJB5O95377 273 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 AMBPP02760 352 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 NPSP0C0P6 89 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ELFN1P0C7U0 828 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ERGP11308 486 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 PTNP21246 168 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 CCKBRP32239 447 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 PAX5Q02548 391 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 IL15RAQ13261 267 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 DUSP5Q16690 384 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 MRPL2Q5T653 305 aaKnown RBP7.26□□□□□ -1.25
ATG4A-201ENST00000343524 C1orf189Q5VU69 101 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ARMC6Q6NXE6 501 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 C22orf39Q6P5X5 142 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM220Q6QAJ8 160 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 Q6ZVU0 165 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 SMIM15Q7Z3B0 74 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 C5orf24Q7Z6I8 188 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 RABEPKQ7Z6M1 372 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 CDC20BQ86Y33 519 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 OR52N4Q8NGI2 321 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 OR51L1Q8NGJ5 315 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ASB5Q8WWX0 329 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 SUSD6Q92537 303 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 MRGPRFQ96AM1 343 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ZG16BQ96DA0 208 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 CNRIP1Q96F85 164 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-201ENST00000343524 SLC35A4Q96G79 324 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 SNX22Q96L94 193 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 C4orf45Q96LM5 186 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 GPX7Q96SL4 187 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-201ENST00000343524 CTDSP1Q9GZU7 261 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ZDHHC6Q9H6R6 413 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 RAB22AQ9UL26 194 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 CYP8B1Q9UNU6 501 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 DHDHQ9UQ10 334 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF292O60281 2723 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 PLXND1Q9Y4D7 1925 aa7.26□□□□□ -1.25
ATG4A-201ENST00000343524 TRIOO75962 3097 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 TGIF2-C20orf24A0A0A6YYL0 155 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 A0A1B0GVT2 93 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 A0A1W2PN81 502 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 E5RGE8 158 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 LDLRAD4O15165 306 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 KAT7O95251 611 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 IFNA21P01568 189 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 HRH1P35367 487 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CHRNA7P36544 502 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CDKN1BP46527 198 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 GABRA4P48169 554 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms