RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 NFYBP25208 207 aa11.15□□□□□ -0.62
LMX1A-202ENST00000342310 AGTR1P30556 359 aa11.15□□□□□ -0.62
LMX1A-202ENST00000342310 FASLGP48023 281 aa11.15□□□□□ -0.62
LMX1A-202ENST00000342310 RPS18P62269 152 aaKnown RBP11.15□□□□□ -0.62
LMX1A-202ENST00000342310 SNTB1Q13884 538 aaKnown RBP11.15□□□□□ -0.62
LMX1A-202ENST00000342310 SMCO1Q147U7 214 aa11.15□□□□□ -0.62
LMX1A-202ENST00000342310 SMRP1Q8NCR6 262 aa11.15□□□□□ -0.62
LMX1A-202ENST00000342310 NANPQ8TBE9 248 aa11.15□□□□□ -0.62
LMX1A-202ENST00000342310 IGLV1-36A0A0B4J1U3 117 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 TRBV5-5A0A0J9YX44 114 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 MT-ATP6P00846 226 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 SNRNP70P08621 437 aaKnown RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 KCNJ3P48549 501 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 PPT1P50897 306 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 SLC16A13Q7RTY0 426 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 CCDC36Q8IYA8 594 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 BVESQ8NE79 360 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 NUBPLQ8TB37 319 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 CDC6Q99741 560 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 URM1Q9BTM9 101 aaKnown RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 PIGLQ9Y2B2 252 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 MMACHCQ9Y4U1 282 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 G3V3Q6 166 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 MS4A18H0YCH9 400 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 CTDSPLO15194 276 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 SGCEO43556 437 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 EIF4E2O60573 245 aaKnown RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 TTRP02766 147 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 CCL2P13500 99 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 CSNK1A1P48729 337 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 AFF3P51826 1226 aaKnown RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 PNLIPRP2P54317 469 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 DMWDQ09019 674 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 MS4A18Q3C1V0 323 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 ELFN2Q5R3F8 820 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 PPP1R3BQ86XI6 285 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 LRRC75AQ8NAA5 344 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 HSD17B11Q8NBQ5 300 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 OR14L1PQ8NHC6 308 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 AKR7LQ8NHP1 331 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 STOML3Q8TAV4 291 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 PRMT8Q9NR22 394 aaPredicted RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 WNT16Q9UBV4 365 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 KLK3P07288 261 aaPredicted RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 DAOP14920 347 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 EMC4Q5J8M3 183 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 CATSPERDQ86XM0 798 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 ESX1Q8N693 406 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 PIGCQ92535 297 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 MCHR2Q969V1 340 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 SLC25A21Q9BQT8 299 aaPredicted RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 MRI1Q9BV20 369 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 RPS10P5Q9NQ39 176 aa11.14□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF275Q9NSD4 429 aaPredicted RBP11.14□□□□□ -0.63
LMX1A-202ENST00000342310 A6NIZ1 184 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 PATE3B3GLJ2 98 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 SIGLEC6O43699 453 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 MED6O75586 246 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 OR7C1O76099 320 aaPredicted RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 LDOC1O95751 146 aaPredicted RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 HOXC4P09017 264 aaPredicted RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 RAG2P55895 527 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 RAP1BP61224 184 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 RAP1AP62834 184 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 RSU1Q15404 277 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 TGIF1Q15583 401 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 IAH1Q2TAA2 248 aaPredicted RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 FAM76BQ5HYJ3 339 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 C11orf87Q6NUJ2 197 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 SLC25A24Q6NUK1 477 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ULBP2Q9BZM5 246 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 EIF5A2Q9GZV4 153 aaKnown RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF442Q9H7R0 627 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 RAB22AQ9UL26 194 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 C14orf166Q9Y224 244 aaKnown RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ZFAND5O76080 213 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 CTRB1P17538 263 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 CCR5P51681 352 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 CCL7P80098 99 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 DCDP81605 110 aaKnown RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 NHLRC3Q5JS37 347 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 OR8B12Q8NGG6 310 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 OR13C8Q8NGS7 320 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 TTC9Q92623 222 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 HOXB13Q92826 284 aaPredicted RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ZC3H10Q96K80 434 aaKnown RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 PRRG4Q9BZD6 226 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ADAM19Q9H013 955 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 OCIAD1Q9NX40 245 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 A0A096LPE4 126 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 A0A1W2PPZ6 126 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 RFPL4AA6NLU0 287 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 RFPL4AL1F8VTS6 287 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 IGKV3-11P04433 115 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 IL5P05113 134 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms