RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TSNAXQ99598 290 aaKnown RBP11.57□□□□□ -0.56
COL18A1-201ENST00000342220 ABHD6Q9BV23 337 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 PLEKHA1Q9HB21 404 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 FOXJ3Q9UPW0 622 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 NPTNQ9Y639 398 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 ZFYVE26Q68DK2 2539 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 TLX3O43711 291 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 CD1AP06126 327 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 LAP3P28838 519 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 DCTDP32321 178 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 MEOX1P50221 254 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 SUCLG1P53597 346 aaKnown RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 SLC18B1Q6NT16 456 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 OR5AK2Q8NH90 309 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 FCAMRQ8WWV6 532 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 WDR89Q96FK6 387 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 SRXN1Q9BYN0 137 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 ULBP2Q9BZM5 246 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 TCF7L1Q9HCS4 588 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 CHMP1AQ9HD42 196 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF71Q9NQZ8 489 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 UFSP2Q9NUQ7 469 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 VSX1Q9NZR4 365 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 ZZEF1O43149 2961 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 TACSTD2P09758 323 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 TMIGD3P0DMS9 266 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 ANXA7P20073 488 aaKnown RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 CDK2P24941 298 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 AIMP2Q13155 320 aaKnown RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 LINC00303Q3SY05 128 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 ELP2Q6IA86 826 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 RELL2Q8NC24 303 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 C11orf40Q8WZ69 217 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 NOX3Q9HBY0 568 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 PROK2Q9HC23 129 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 CA10Q9NS85 328 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 TAS2R3Q9NYW6 316 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 MGAT4CQ9UBM8 478 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 B4GALT7Q9UBV7 327 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 MRM2Q9UI43 246 aaKnown RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 TMEM269A0A1B0GVZ9 245 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 C21orf140B9A014 251 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 IGHV2-70P01814 119 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 CRYBA1P05813 215 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 GPX4P36969 197 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 P2RY4P51582 365 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 DEFA6Q01524 100 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 PLA2G7Q13093 441 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 SLC35D3Q5M8T2 416 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 SEZ6L2Q6UXD5 910 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 STAC2Q6ZMT1 411 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF283Q8N7M2 679 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 SCARB1Q8WTV0 552 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 TMEM106AQ96A25 262 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 S100A16Q96FQ6 103 aaKnown RBP11.56□□□□□ -0.56
COL18A1-201ENST00000342220 CMTM3Q96MX0 182 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 ANGPTL4Q9BY76 406 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 GHRLQ9UBU3 117 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 B3GALT5Q9Y2C3 310 aa11.56□□□□□ -0.56
COL18A1-201ENST00000342220 WISP2O76076 250 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 DXOO77932 396 aaKnown RBP11.55□□□□□ -0.56
COL18A1-201ENST00000342220 CD46P15529 392 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 ADRA2CP18825 462 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 CRABP1P29762 137 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 CASP6P55212 293 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 SLC35A1P78382 337 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
COL18A1-201ENST00000342220 KLHL24Q6TFL4 600 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 SSX9Q7RTT3 188 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 SLC16A9Q7RTY1 509 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 TMPRSS12Q86WS5 348 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 ARL6IP6Q8N6S5 226 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 LRRC75AQ8NAA5 344 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 OR2M7Q8NG81 312 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 GLYATL2Q8WU03 294 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 FBXO17Q96EF6 278 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 COMMD4Q9H0A8 199 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF69Q9UC07 566 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 A0A1W2PR80 420 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 FTCDNL1E5RQL4 147 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 SULT1C2O00338 296 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 P2RY10O00398 339 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 GPR37O15354 613 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 NPIPB7O75200 414 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 NEURL1O76050 574 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 SFTPCP11686 197 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 B4GALT1P15291 398 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 EIF2S3P41091 472 aaKnown RBP11.55□□□□□ -0.56
COL18A1-201ENST00000342220 RIDAP52758 137 aaKnown RBP11.55□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF684Q5T5D7 378 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 BATF2Q8N1L9 274 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 JAGN1Q8N5M9 183 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 BPIFCQ8NFQ6 507 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 RPS4Y2Q8TD47 263 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
COL18A1-201ENST00000342220 NPDC1Q9NQX5 325 aaPredicted RBP11.55□□□□□ -0.56
COL18A1-201ENST00000342220 MRPL22Q9NWU5 206 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms