RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 OR2C1O95371 312 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CYB5AP00167 134 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 OR1D2P34982 312 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CLEC2AQ6UVW9 174 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 GLRX5Q86SX6 157 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 OR4K17Q8NGC6 315 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 MRPL13Q9BYD1 178 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 M0R1X1 148 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 DNASE1L1P49184 302 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CACNG1Q06432 222 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM207Q6UWW9 146 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 THSD4Q6ZMP0 1018 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 SLC35E3Q7Z769 313 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CATSPERDQ86XM0 798 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 SFTPA1Q8IWL2 248 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 MRPS24Q96EL2 167 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ARHGDIGQ99819 225 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 SLC6A13Q9NSD5 602 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 OR5H14A6NHG9 310 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ANXA2P2A6NMY6 339 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ANXA2P07355 339 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 KITLGP21583 273 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 KIR2DL3P43628 341 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ART1P52961 327 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 PRSS53Q2L4Q9 553 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TOR2AQ5JU69 321 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 KDM4FA0A1W2PPD8 638 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM212A6NML5 194 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 MCRIP1C9JLW8 97 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 HCRTR2O43614 444 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 MBPP02686 304 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 BTF3P20290 206 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TLX1P31314 330 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TAS2R60P59551 318 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 GFI1BQ5VTD9 330 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF550Q7Z398 422 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 IGSF8Q969P0 613 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM70Q9BUB7 260 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 GSX1Q9H4S2 264 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TCRBV5S2A0A599 114 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 COCHO43405 550 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 PATE4P0C8F1 98 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 AVPR2P30518 371 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TAF10Q12962 218 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 STEAP2Q8NFT2 490 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 FIBINQ8TAL6 211 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 EGLN3Q9H6Z9 239 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CRISP1P54107 249 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 OPCMLQ14982 345 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 LRFN4Q6PJG9 635 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 HSH2DQ96JZ2 352 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 GPR62Q9BZJ7 368 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CNTD2Q9H8S5 307 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TLN2Q9Y4G6 2542 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ATP1B1P05026 303 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 HLA-DOBP13765 273 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 RPS14P62263 151 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 OR2AE1Q8NHA4 323 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 WDR92Q96MX6 357 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CNIH4Q9P003 139 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 LPAR3Q9UBY5 353 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF629Q9UEG4 869 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 FAM166BA8MTA8 275 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 RNGTTO60942 597 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 CA11O75493 328 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 NTF3P20783 257 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 FAM169BQ8N8A8 192 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 DDIT4LQ96D03 193 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 RARRES2Q99969 163 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 MRTO4Q9UKD2 239 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 IGKV6-21A0A0C4DH24 114 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM235A6NFC5 223 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF814B7Z6K7 855 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 H3BTX0 84 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 IQCF3P0C7M6 154 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 TACR3P29371 465 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 RPL7L1Q6DKI1 246 aaKnown RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 PODNL1Q6PEZ8 512 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 MRGPRGQ86SM5 289 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 MAFAQ8NHW3 353 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ASB17Q8WXJ9 295 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 NRCAMQ92823 1304 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF48Q96MX3 618 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-201ENST00000341594 FLVCR1Q9Y5Y0 555 aa3.21□□□□□ -1.9
SYNE1-201ENST00000341594 HIST1H1BP16401 226 aaKnown RBP3.2□□□□□ -1.9
SYNE1-201ENST00000341594 FRG2Q64ET8 278 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 GLB1LQ6UWU2 654 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 TCTEX1D1Q8N7M0 179 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF480Q8WV37 535 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 FRG2BQ96QU4 278 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 MBNL1Q9NR56 388 aaKnown RBP3.2□□□□□ -1.9
SYNE1-201ENST00000341594 OTOGLQ3ZCN5 2332 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 CCDC187A0A096LP49 1063 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 GALR3O60755 368 aaPredicted RBP3.2□□□□□ -1.9
SYNE1-201ENST00000341594 TFF1P04155 84 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 CD40P25942 277 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 SLC6A8P48029 635 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 ARL4DP49703 201 aa3.2□□□□□ -1.9
SYNE1-201ENST00000341594 RGS7BPQ6MZT1 257 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms