RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 COMMD2Q86X83 199 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 ANGPTL5Q86XS5 388 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 NUDCD2Q8WVJ2 157 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 PIGQQ9BRB3 760 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 MYOZ1Q9NP98 299 aaPredicted RBP13.21□□□□□ -0.29
TPM3-208ENST00000341485 GPR84Q9NQS5 396 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 GLTPQ9NZD2 209 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 FBLN5Q9UBX5 448 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 OR14I1A6ND48 311 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 ARPC5O15511 151 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 RGS11O94810 467 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 WDPCPO95876 746 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 ZNF17P17021 662 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 SRD5A2P31213 254 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 H3F3AP84243 136 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 SRSF6Q13247 344 aaKnown RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 OR1C1Q15619 314 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 NKPD1Q17RQ9 610 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 SLC22A6Q4U2R8 563 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 C3P1Q6ZMU1 363 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 C17orf107Q6ZR85 190 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 COMMD7Q86VX2 200 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 C12orf45Q8N5I9 185 aaPredicted RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 OR14L1PQ8NHC6 308 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 FAM71F1Q96KD3 344 aaPredicted RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 SIGLEC12Q96PQ1 595 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 DEPPQ9NTK1 212 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 PLA2G3Q9NZ20 509 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 BOKQ9UMX3 212 aaPredicted RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 VSIG4Q9Y279 399 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 MUC6Q6W4X9 2439 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 FXYD6-FXYD2A0A087WZ82 144 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 DISC1C4P0D8 188 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 NKX2-8O15522 239 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 TLX3O43711 291 aaPredicted RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 ZIC3O60481 467 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 SNAPC5O75971 98 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 ERCC1P07992 297 aaPredicted RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 GNB3P16520 340 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 CCL1P22362 96 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 NHLH1Q02575 133 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 HLXQ14774 488 aaPredicted RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 MEF2DQ14814 521 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 RTP5Q14D33 572 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 SGCAQ16586 387 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 LY6G6FQ5SQ64 297 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 PHYHD1Q5SRE7 291 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 SFRP5Q5T4F7 317 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 C11orf88Q6PI97 169 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 TMUB2Q71RG4 321 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 FAM57BQ71RH2 274 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 CD163Q86VB7 1156 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 ZNF283Q8N7M2 679 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 ZNF416Q9BWM5 594 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 GSX2Q9BZM3 304 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 FXYD6Q9H0Q3 95 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 SLC2A8Q9NY64 477 aa13.2□□□□□ -0.3
TPM3-208ENST00000341485 NCOA6Q14686 2063 aaPredicted RBP13.2□□□□□ -0.3
TPM3-208ENST00000341485 A0A0A6YYD4 124 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 IGHV3-15A0A0B4J1V0 119 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 C5orf63A6NC05 138 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 E9PLN8 166 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 NEURL1O76050 574 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 CAMK2BQ13554 666 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 RNASE10Q5GAN6 216 aaKnown RBP13.19□□□□□ -0.3
TPM3-208ENST00000341485 OR52W1Q6IF63 320 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 GLIPR1L1Q6UWM5 242 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 YRDCQ86U90 279 aaKnown RBP13.19□□□□□ -0.3
TPM3-208ENST00000341485 OR10R2Q8NGX6 335 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 MRGPRFQ96AM1 343 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 C1orf147Q96MC9 270 aaPredicted RBP13.19□□□□□ -0.3
TPM3-208ENST00000341485 FAM173AQ9BQD7 235 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 NICN1Q9BSH3 213 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 SELENOIQ9C0D9 397 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 MRPS28Q9Y2Q9 187 aaKnown RBP13.19□□□□□ -0.3
TPM3-208ENST00000341485 LRRC3CA6NJW4 275 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 SSX5O60225 188 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 TRAPPC6AO75865 159 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 MPZP25189 248 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 GDF1P27539 372 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 S100A11P31949 105 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 OR3A4PP47883 348 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 CSNK1A1P48729 337 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 RAB14P61106 215 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 GRB2P62993 217 aaKnown RBP13.19□□□□□ -0.3
TPM3-208ENST00000341485 GFOD2Q3B7J2 385 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 NHLRC3Q5JS37 347 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 ZNF101Q8IZC7 436 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 TMEM54Q969K7 222 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 ZNF385AQ96PM9 386 aaKnown RBP13.19□□□□□ -0.3
TPM3-208ENST00000341485 UCN2Q96RP3 112 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 LPAR5Q9H1C0 372 aa13.19□□□□□ -0.3
TPM3-208ENST00000341485 PINLYPA6NC86 204 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 SCGNO76038 276 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
TPM3-208ENST00000341485 GSK3AP49840 483 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 LSM6P62312 80 aaKnown RBP13.18□□□□□ -0.3
TPM3-208ENST00000341485 CXADRP78310 365 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms