RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.36□□□□□ -1.07
NECAP1-201ENST00000339754 MRPL22Q9NWU5 206 aaKnown RBP8.36□□□□□ -1.07
NECAP1-201ENST00000339754 LUZP4Q9P127 313 aa8.36□□□□□ -1.07
NECAP1-201ENST00000339754 OR1A2Q9Y585 309 aa8.36□□□□□ -1.07
NECAP1-201ENST00000339754 WNT6Q9Y6F9 365 aa8.36□□□□□ -1.07
NECAP1-201ENST00000339754 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SYT7O43581 403 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 DEDDO75618 318 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 CSTAP01040 98 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 TRGC2P03986 189 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 C8AP07357 584 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SLC35G6P0C7Q6 338 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 RNH1P13489 461 aaKnown RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 HPGDP15428 266 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 GLRA1P23415 457 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 FPR2P25090 351 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 CHATP28329 748 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 CAMLGP49069 296 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SUCLG1P53597 346 aaKnown RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SLC35A1P78382 337 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 FAM78AQ5JUQ0 283 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 HIST2H3PS2Q5TEC6 136 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF385CQ66K41 422 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 PRSS41Q7RTY9 318 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 ATG4DQ86TL0 474 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 HPSE2Q8WWQ2 592 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 CYYR1Q96J86 154 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 WDR92Q96MX6 357 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 OR2A5Q96R48 311 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 PRRX2Q99811 253 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 LMF2Q9BU23 707 aaKnown RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 TWSG1Q9GZX9 223 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 WFDC1Q9HC57 220 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 MBNL1Q9NR56 388 aaKnown RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 HCFC1R1Q9NWW0 138 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 LRIT1Q9P2V4 623 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 PRODH2Q9UF12 536 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 HHLA2Q9UM44 414 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 MRPS2Q9Y399 296 aaKnown RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 TRPM6Q9BX84 2022 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 DOCK9Q9BZ29 2069 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 A0A087WWC5 75 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 IGLON5A6NGN9 336 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 CCL16O15467 120 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 HEXBP07686 556 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 HCKP08631 526 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 NHLH2Q02577 135 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 ERV3-1Q14264 604 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 LCE2DQ5TA82 110 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 AADACL3Q5VUY0 350 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SLC18B1Q6NT16 456 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 FBXO46Q6PJ61 603 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-201ENST00000339754 Q7L0L9 218 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 DPPA2Q7Z7J5 298 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 MARCH3Q86UD3 253 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 LHFPL1Q86WI0 220 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 AVL9Q8NBF6 648 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 M1APQ8TC57 530 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 RAB24Q969Q5 203 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 RAB39BQ96DA2 213 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 GINS3Q9BRX5 216 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 PBDC1Q9BVG4 233 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 IL23AQ9NPF7 189 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 PILRAQ9UKJ1 303 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 MEMO1Q9Y316 297 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 LRP12Q9Y561 859 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SLCO1B1Q9Y6L6 691 aa8.35□□□□□ -1.07
NECAP1-201ENST00000339754 SERINC4A6NH21 518 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 PRR19A6NJB7 356 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 H3BQ15 152 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 ADAM10O14672 748 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 CTSVO60911 334 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 HLA-DQA2P01906 255 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 IFI6P09912 130 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 LINC00271P0C7V0 271 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 TRGC1P0CF51 173 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 PPP1CCP36873 323 aaKnown RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 BTG2P78543 158 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 IAH1Q2TAA2 248 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 HIKESHIQ53FT3 197 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 OR2T2Q6IF00 324 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 TCEAL6Q6IPX3 200 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 CACUL1Q86Y37 369 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 NKAIN3Q8N8D7 197 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 SUMF2Q8NBJ7 301 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 BEND2Q8NDZ0 799 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 OR52N4Q8NGI2 321 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 OR13D1Q8NGV5 346 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 OR13G1Q8NGZ3 307 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 ANKRD9Q96BM1 317 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF524Q96C55 264 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 KTI12Q96EK9 354 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 NICN1Q9BSH3 213 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 NDUFAF3Q9BU61 184 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 ABHD6Q9BV23 337 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 LYRM4Q9HD34 91 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 FAM86C1Q9NVL1 165 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 SLC5A6Q9Y289 635 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms