RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 STOMP27105 288 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 POU3F4P49335 361 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 EIF2S3LQ2VIR3 472 aaKnown RBP13.44□□□□□ -0.26
LIMS1-202ENST00000338045 C1orf185Q5T7R7 199 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 CCDC36Q8IYA8 594 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 GABRG1Q8N1C3 465 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 CISD2Q8N5K1 135 aaKnown RBP13.44□□□□□ -0.26
LIMS1-202ENST00000338045 POC5Q8NA72 575 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 SYNPRQ8TBG9 265 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 SSC4DQ8WTU2 575 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 PP6455Q8WZ26 134 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 SPSB4Q96A44 273 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 STARD4Q96DR4 205 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 REEP6Q96HR9 211 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 POM121L2Q96KW2 1035 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 ABHD1Q96SE0 405 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 UQCC2Q9BRT2 126 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 TBC1D24Q9ULP9 559 aa13.44□□□□□ -0.26
LIMS1-202ENST00000338045 IGF2RP11717 2491 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 ALDOBP05062 364 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 EDN3P14138 238 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 TIMP3P35625 211 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 ART1P52961 327 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 DEFA1P59665 94 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 DEFA3P59666 94 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 GSG1Q2KHT4 349 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 TRIM16LQ309B1 348 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 C2orf76Q3KRA6 126 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 UTS2BQ765I0 119 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 JAGN1Q8N5M9 183 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 DTX3Q8N9I9 347 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 C1orf162Q8NEQ5 155 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-202ENST00000338045 OR2AE1Q8NHA4 323 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 ZFP3Q96NJ6 502 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 SORCS2Q96PQ0 1159 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 CHST5Q9GZS9 411 aa13.43□□□□□ -0.26
LIMS1-202ENST00000338045 IGKV1-9A0A0C4DH69 117 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 C1QTNF9BB2RNN3 333 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 LDLRAD4O15165 306 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 XRCC2O43543 280 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 PTTG1O95997 202 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 C1QTNF9P0C862 333 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-202ENST00000338045 PER3P56645 1201 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 PLP2Q04941 152 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 SCN1BQ07699 218 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 TNK1Q13470 666 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 GABRA6Q16445 453 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 OR4D6Q8NGJ1 314 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 NKX3-1Q99801 234 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-202ENST00000338045 CNTD2Q9H8S5 307 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 hCG_38984A0A1B0GV85 526 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 C5orf49A4QMS7 147 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 CTDSPLO15194 276 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 SERPINA5P05154 406 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 TMIGD3P0DMS9 266 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-202ENST00000338045 PRF1P14222 555 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 FAHP16930 419 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 ACKR3P25106 362 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 MNDAP41218 407 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 CAPZA1P52907 286 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 PITPNAQ00169 270 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 PLA2G7Q13093 441 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 MDP1Q86V88 176 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 SEMA6DQ8NFY4 1073 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 S100A16Q96FQ6 103 aaKnown RBP13.42□□□□□ -0.26
LIMS1-202ENST00000338045 COX4I2Q96KJ9 171 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 PIGLQ9Y2B2 252 aa13.42□□□□□ -0.26
LIMS1-202ENST00000338045 TMEM272A0A1B0GTI8 110 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 RAD51DO75771 328 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 LYZL6O75951 148 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 OCMP0CE72 109 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-202ENST00000338045 ARSBP15848 533 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 MMP15P51511 669 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 FAM3AP98173 230 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 ZNF92Q03936 586 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 ASAH1Q13510 395 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 OR8B8Q15620 311 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 RPRMLQ8N4K4 120 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 NAXEQ8NCW5 288 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 AKAP1Q92667 903 aaKnown RBP eCLIP13.41□□□□□ -0.26
LIMS1-202ENST00000338045 PTX4Q96A99 478 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 SNRNP40Q96DI7 357 aaKnown RBP13.41□□□□□ -0.26
LIMS1-202ENST00000338045 PROCRQ9UNN8 238 aa13.41□□□□□ -0.26
LIMS1-202ENST00000338045 CIB4A0PJX0 185 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 IL2RAP01589 272 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 CEACAM8P31997 349 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-202ENST00000338045 ZNF93P35789 620 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-202ENST00000338045 MAP2K3P46734 347 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 RIPPLY1Q0D2K3 151 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 UBE2V2Q15819 145 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 NDUFA5Q16718 116 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 TRIQKQ629K1 86 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 TMEM42Q69YG0 159 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 ZNF610Q8N9Z0 462 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 LILRB1Q8NHL6 650 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-202ENST00000338045 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
LIMS1-202ENST00000338045 APOBEC3DQ96AK3 386 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms