RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TMEM200AQ86VY9 491 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 OR14K1Q8NGZ2 314 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 IGFBPL1Q8WX77 278 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 FCGR1BQ92637 280 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 MUL1Q969V5 352 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 FAM192AQ9GZU8 254 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 PLK3Q9H4B4 646 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 UBTD1Q9HAC8 227 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 SF3B6Q9Y3B4 125 aaKnown RBP14.96□□□□□ -0.01
CHGA-202ENST00000334654 V9GYS6 101 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 ITPR2Q14571 2701 aa14.96□□□□□ -0.01
CHGA-202ENST00000334654 CD300LBA8K4G0 201 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 IQCF6A8MYZ5 107 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 H3BSH0 61 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 LMX1BO60663 402 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 CPEP16870 476 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 JUNBP17275 347 aaPredicted RBP14.95□□□□□ -0.02
CHGA-202ENST00000334654 CFL1P23528 166 aaKnown RBP14.95□□□□□ -0.02
CHGA-202ENST00000334654 MAGEB1P43366 347 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 MMP15P51511 669 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 GPR50Q13585 617 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 NEDD8Q15843 81 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 SSX1Q16384 188 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 ARMCX4Q5H9R4 360 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 LIPKQ5VXJ0 399 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 C11orf71Q6IPW1 123 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 DOK3Q7L591 496 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 KRT74Q7RTS7 529 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 PHC2Q8IXK0 858 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 MUC15Q8N387 334 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 ZNF676Q8N7Q3 588 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 OR56B2PQ8NGI1 322 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 FAM71F1Q96KD3 344 aaPredicted RBP14.95□□□□□ -0.02
CHGA-202ENST00000334654 POLQO75417 2590 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 DHRS3O75911 302 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 TFAP2AP05549 437 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 ACHEP22303 614 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 Q6ZR03 302 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 FBXL14Q8N1E6 418 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 OR13C5Q8NGS8 318 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 GTF3AQ92664 365 aaKnown RBP14.95□□□□□ -0.02
CHGA-202ENST00000334654 COMMD4Q9H0A8 199 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 LIME1Q9H400 295 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 TAAR3PQ9P1P4 343 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 ZNF281Q9Y2X9 895 aa14.95□□□□□ -0.02
CHGA-202ENST00000334654 SMIM31A0A1B0GVY4 71 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 A0A1B0GWJ7 208 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 GGT3PA6NGU5 568 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 VSTM5A8MXK1 200 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 B9A039 149 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 SYT7O43581 403 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 LIPAP38571 399 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 TSTQ16762 297 aaKnown RBP14.94□□□□□ -0.02
CHGA-202ENST00000334654 COMMD2Q86X83 199 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 OR5AS1Q8N127 324 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 OR8G5Q8NG78 346 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 TRAF4Q9BUZ4 470 aaPredicted RBP14.94□□□□□ -0.02
CHGA-202ENST00000334654 PPP1R3EQ9H7J1 279 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 ASH1LQ9NR48 2969 aaKnown RBP14.94□□□□□ -0.02
CHGA-202ENST00000334654 CBLN4Q9NTU7 201 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 HHLA2Q9UM44 414 aa14.94□□□□□ -0.02
CHGA-202ENST00000334654 USF3Q68DE3 2245 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 TRBV5-5A0A0J9YX44 114 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 A0A1B0GVI7 797 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 SELEP16581 610 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 PSMB9P28065 219 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 DDOSTP39656 456 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 MAP2K3P46734 347 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 BHLHE23Q8NDY6 225 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 NRGNQ92686 78 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 UFD1Q92890 307 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 ITFG2Q969R8 447 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 RHBDD3Q9Y3P4 386 aa14.93□□□□□ -0.02
CHGA-202ENST00000334654 CHD3Q12873 2000 aaKnown RBP14.92□□□□□ -0.02
CHGA-202ENST00000334654 DHRS7CA6NNS2 312 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 TIMM8AO60220 97 aaPredicted RBP14.92□□□□□ -0.02
CHGA-202ENST00000334654 MTRF1O75570 445 aaKnown RBP14.92□□□□□ -0.02
CHGA-202ENST00000334654 SC5DO75845 299 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 FAHP16930 419 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 CD53P19397 219 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 ALDH3B1P43353 468 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 ALDH3B2P48448 385 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 SELENOVP59797 346 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 RPS25P62851 125 aaKnown RBP14.92□□□□□ -0.02
CHGA-202ENST00000334654 AGAP6Q5VW22 663 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 CCDC54Q8NEL0 328 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 SEMA6DQ8NFY4 1073 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 ADAT3Q96EY9 351 aaPredicted RBP14.92□□□□□ -0.02
CHGA-202ENST00000334654 SLC30A2Q9BRI3 323 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 MSL2Q9HCI7 577 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 ZNF275Q9NSD4 429 aaPredicted RBP14.92□□□□□ -0.02
CHGA-202ENST00000334654 FAIMQ9NVQ4 179 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 LAMP3Q9UQV4 416 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 PIGLQ9Y2B2 252 aa14.92□□□□□ -0.02
CHGA-202ENST00000334654 FLNBO75369 2602 aaKnown RBP14.92□□□□□ -0.02
CHGA-202ENST00000334654 A6NIN4 97 aa14.91□□□□□ -0.02
CHGA-202ENST00000334654 ZSCAN5BA6NJL1 495 aa14.91□□□□□ -0.02
CHGA-202ENST00000334654 RIPPLY1Q0D2K3 151 aa14.91□□□□□ -0.02
CHGA-202ENST00000334654 INSL4Q14641 139 aa14.91□□□□□ -0.02
CHGA-202ENST00000334654 YIF1BQ5BJH7 314 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms