RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ZNF789Q5FWF6 425 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 ENTPD8Q5MY95 495 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 MZB1Q8WU39 189 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 TREX1Q9NSU2 369 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 CLEC2DQ9UHP7 191 aa9.45□□□□□ -0.9
SPTBN1-201ENST00000333896 G3V3Y1 287 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 GYPAP02724 150 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 NAAAQ02083 359 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 PNLIPRP3Q17RR3 467 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 BTLAQ7Z6A9 289 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 MUCL1Q96DR8 90 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 C19orf43Q9BQ61 176 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 MRPS28Q9Y2Q9 187 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 TCRBV21S2A2A0A5A6 115 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 CD300CQ08708 224 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 SSX1Q16384 188 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 NAT8Q9UHE5 227 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 AKR7A3O95154 331 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 LINC00614P0C842 121 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 RING1Q06587 406 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 DPY19L2P2Q6ZN68 376 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 EIF4E3Q8N5X7 224 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 OR1L3Q8NH93 324 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 PELI2Q9HAT8 420 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 RBFOX3A6NFN3 312 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 FZD9O00144 591 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 NDUFB7P17568 137 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 ZNF93P35789 620 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 SYT9Q86SS6 491 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 OR5D13Q8NGL4 314 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 C17orf105B2RV13 164 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 ST3GAL2Q16842 350 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 WBP2NLQ6ICG8 309 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 CBLN2Q8IUK8 224 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 PARP11Q9NR21 331 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 DNMT3BQ9UBC3 853 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 ZNF443Q9Y2A4 671 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 TSC2P49815 1807 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 SOCS7O14512 581 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 ACAA2P42765 397 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 SLC6A11P48066 632 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 GPR20Q99678 358 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 WASHC3Q9Y3C0 194 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 CLDN16Q9Y5I7 305 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 LEFTY1O75610 366 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 EGR3Q06889 387 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 RIMKLAQ8IXN7 391 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 FAM169BQ8N8A8 192 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 OR5R1Q8NH85 324 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 GPR174Q9BXC1 333 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 CLDND1Q9NY35 253 aa9.44□□□□□ -0.9
SPTBN1-201ENST00000333896 DEGS1O15121 323 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 NEURL1O76050 574 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 SUOXP51687 545 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 KLRB1Q12918 225 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 PLXDC1Q8IUK5 500 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 FGF20Q9NP95 211 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 NKX6-3A6NJ46 265 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 SLC25A4P12235 298 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 HIST1H1CP16403 213 aaKnown RBP9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 GPX2P18283 190 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 CD96P40200 585 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 LGALSLQ3ZCW2 172 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 EMC4Q5J8M3 183 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 MBD1Q9UIS9 605 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 PDE6DO43924 150 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 FZD6O60353 706 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 GABRA1P14867 456 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 EPHA2P29317 976 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 BRS3P32247 399 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 GJA4P35212 333 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 CSNK1G2P78368 415 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 NCMAPQ5T1S8 102 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 PAM16Q9Y3D7 125 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 WNT6Q9Y6F9 365 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 FCN1O00602 326 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 RAB29O14966 203 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 RNF224P0DH78 156 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 DUSP3P51452 185 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 RHOBP62745 196 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 TEAD2Q15562 447 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 LSRQ86X29 649 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 SYS1Q8N2H4 156 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 CHST14Q8NCH0 376 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 OR51H1Q8NH63 302 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 RAB37Q96AX2 223 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 APIPQ96GX9 242 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 RSRP1Q9BUV0 290 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 LRRK1Q38SD2 2015 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 OR2J2O76002 312 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 SFTPCP11686 197 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 PAX5Q02548 391 aa9.43□□□□□ -0.9
SPTBN1-201ENST00000333896 TMEM37Q8WXS4 190 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms