RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 OR8B12Q8NGG6 310 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 KCNG3Q8TAE7 436 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 POC1BQ8TC44 478 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 RNF138Q8WVD3 245 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 NARS2Q96I59 477 aaKnown RBP13.59□□□□□ -0.23
BRCC3-201ENST00000330045 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 CSAG2Q9Y5P2 127 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 PGAM2P15259 253 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 OR3A4PP47883 348 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF121P58317 390 aaPredicted RBP13.58□□□□□ -0.23
BRCC3-201ENST00000330045 GABREP78334 506 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 TMEM128Q5BJH2 165 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 PLAC9Q5JTB6 97 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 PGAP1Q75T13 922 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.23
BRCC3-201ENST00000330045 SLC38A9Q8NBW4 561 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 OR4K17Q8NGC6 315 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 MARC2Q969Z3 335 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 NMES1Q9C002 83 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 BANF2Q9H503 90 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 GPR84Q9NQS5 396 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.23
BRCC3-201ENST00000330045 CDC14BO60729 498 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 HIST1H1DP16402 221 aaKnown RBP13.58□□□□□ -0.24
BRCC3-201ENST00000330045 NAT1P18440 290 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 CX3CR1P49238 355 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 ARHGDIBP52566 201 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 CARD17Q5XLA6 110 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 NAA40Q86UY6 237 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 ARMC10Q8N2F6 343 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 OR1S2Q8NGQ3 325 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 DCUN1D4Q92564 292 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 FAM71F1Q96KD3 344 aaPredicted RBP13.58□□□□□ -0.24
BRCC3-201ENST00000330045 C1orf147Q96MC9 270 aaPredicted RBP13.58□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF319Q9P2F9 582 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 ASH2LQ9UBL3 628 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 ANAPC10Q9UM13 185 aa13.58□□□□□ -0.24
BRCC3-201ENST00000330045 HCKP08631 526 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 P2RY4P51582 365 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 TMEM50BP56557 158 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 CYCSP99999 105 aaKnown RBP13.57□□□□□ -0.24
BRCC3-201ENST00000330045 NKAIN1Q4KMZ8 207 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 VAX1Q5SQQ9 334 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 FAM69BQ5VUD6 431 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 UQCC3Q6UW78 93 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 RABEPKQ7Z6M1 372 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 OR5L2Q8NGL0 311 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 PIK3IP1Q96FE7 263 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 TMEM59Q9BXS4 323 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 METTL7AQ9H8H3 244 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 GPR132Q9UNW8 380 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 A0A1W2PNR3 127 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 TRAF3IP2O43734 574 aaPredicted RBP13.57□□□□□ -0.24
BRCC3-201ENST00000330045 PLATP00750 562 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 PTGDSP41222 190 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 ACTBL2Q562R1 376 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 SLC25A47Q6Q0C1 308 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 MAML2Q8IZL2 1156 aaPredicted RBP13.57□□□□□ -0.24
BRCC3-201ENST00000330045 ARRDC1Q8N5I2 433 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 ADPRHL1Q8NDY3 354 aa13.57□□□□□ -0.24
BRCC3-201ENST00000330045 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
BRCC3-201ENST00000330045 TRBV6-7A0A0A0MS04 114 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 TEX13DA0A0J9YY54 714 aaPredicted RBP13.56□□□□□ -0.24
BRCC3-201ENST00000330045 RAB19A4D1S5 217 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 MPTX1A8MV57 137 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 RER1O15258 196 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF17P17021 662 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 NPY4RP50391 375 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 OR10G3Q8NGC4 313 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 STOML3Q8TAV4 291 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 OR5B2Q96R09 309 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 GPER1Q99527 375 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 WDR77Q9BQA1 342 aaPredicted RBP13.56□□□□□ -0.24
BRCC3-201ENST00000330045 RNF126Q9BV68 326 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 C5orf66Q9H5L9 145 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 ASF1BQ9NVP2 202 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 WIF1Q9Y5W5 379 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 A0A1W2PP11 408 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 F8VVB4 439 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 F8VWA3 439 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 TPT1P13693 172 aaKnown RBP13.56□□□□□ -0.24
BRCC3-201ENST00000330045 ANOS1P23352 680 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 ZXDAP98168 799 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF169Q14929 603 aaPredicted RBP13.56□□□□□ -0.24
BRCC3-201ENST00000330045 GFOD2Q3B7J2 385 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 LYSMD4Q5XG99 296 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 GTPBP8Q8N3Z3 284 aaPredicted RBP13.56□□□□□ -0.24
BRCC3-201ENST00000330045 OR56B1Q8NGI3 324 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 OR6X1Q8NH79 312 aa13.56□□□□□ -0.24
BRCC3-201ENST00000330045 ZC3H10Q96K80 434 aaKnown RBP13.56□□□□□ -0.24
BRCC3-201ENST00000330045 IGLV3-32A0A0A0MS00 114 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 FAM74A7A6NL05 159 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 CEACAM18A8MTB9 384 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 PATE3B3GLJ2 98 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 ZNF814B7Z6K7 855 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 FGF16O43320 207 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 CRTAPO75718 401 aaPredicted RBP13.55□□□□□ -0.24
BRCC3-201ENST00000330045 RAD51DO75771 328 aa13.55□□□□□ -0.24
BRCC3-201ENST00000330045 TIAF1O95411 115 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms