RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CCDC59Q9P031 241 aaKnown RBP8.83□□□□□ -1
VIPAS39-201ENST00000327028 FOXJ3Q9UPW0 622 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 PIGLQ9Y2B2 252 aa8.83□□□□□ -1
VIPAS39-201ENST00000327028 UBR5O95071 2799 aaPredicted RBP8.82□□□□□ -1
VIPAS39-201ENST00000327028 TRAV8-7A0A075B6U6 113 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 CLEC2LP0C7M8 214 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 ACKR3P25106 362 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 RPS19P39019 145 aaKnown RBP8.82□□□□□ -1
VIPAS39-201ENST00000327028 TNK1Q13470 666 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 ZBTB37Q5TC79 503 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 SERPINA12Q8IW75 414 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 OR1J1Q8NGS3 322 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 PDCD5O14737 125 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 FAHP16930 419 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 ZNF182P17025 639 aaPredicted RBP8.82□□□□□ -1
VIPAS39-201ENST00000327028 GNALP38405 381 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 DDOSTP39656 456 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 RIPPLY1Q0D2K3 151 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 HLXQ14774 488 aaPredicted RBP8.82□□□□□ -1
VIPAS39-201ENST00000327028 SPATA46Q5T0L3 261 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 LRRTM1Q86UE6 522 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 LINC01560Q8TB33 94 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 SLC25A40Q8TBP6 338 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 PP6455Q8WZ26 134 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 SLC25A46Q96AG3 418 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 SPEF1Q9Y4P9 236 aa8.82□□□□□ -1
VIPAS39-201ENST00000327028 FLNCQ14315 2725 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 DOPEY1Q5JWR5 2465 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 DPRXA6NFQ7 191 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 TUBAL3A6NHL2 446 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 ATP6V1G2-DDX39BF2Z307 99 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 PEX19P40855 299 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 PRSS12P56730 875 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 ERVS71-1P61550 626 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 PPP3R1P63098 170 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 NKX6-1P78426 367 aaPredicted RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 MXD1Q05195 221 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 BSPH1Q075Z2 132 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 SPOCK1Q08629 439 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 SNTB2Q13425 540 aaKnown RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 ZNF529Q6P280 563 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 UTS2BQ765I0 119 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 OR56B2PQ8NGI1 322 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 OR5D14Q8NGL3 314 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 MARS2Q96GW9 593 aaKnown RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 DACH2Q96NX9 599 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 OR2J1Q9GZK6 312 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 CHST5Q9GZS9 411 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 ZCCHC4Q9H5U6 513 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 ESRP2Q9H6T0 727 aaKnown RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 HEATR1Q9H583 2144 aaKnown RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 SPTBN1Q01082 2364 aaKnown RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 ZNF816-ZNF321PA0A0X1KG74 233 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 ANKRD61A6NGH8 418 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 GGT3PA6NGU5 568 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 RAC2P15153 192 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 RAB3BP20337 219 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 SNTB1Q13884 538 aaKnown RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 NCMAPQ5T1S8 102 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 KRT74Q7RTS7 529 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 CSNK2A3Q8NEV1 391 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 NUP37Q8NFH4 326 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 OR1M1Q8NGA1 313 aa8.81□□□□□ -1
VIPAS39-201ENST00000327028 RALYQ9UKM9 306 aaKnown RBP8.81□□□□□ -1
VIPAS39-201ENST00000327028 A0A0G2JK05 382 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 A6NIN4 97 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 CD300LBA8K4G0 201 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 ABCD4O14678 606 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 SULT1B1O43704 296 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 SELEP16581 610 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 ADRA2CP18825 462 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 RAB3AP20336 220 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 SOX6P35712 828 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 RORCP51449 518 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 RPS23P62266 143 aaKnown RBP8.8□□□□□ -1
VIPAS39-201ENST00000327028 HNRNPA0Q13151 305 aaKnown RBP8.8□□□□□ -1
VIPAS39-201ENST00000327028 DGUOKQ16854 277 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 CEP78Q5JTW2 689 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 MBNL2Q5VZF2 373 aaKnown RBP8.8□□□□□ -1
VIPAS39-201ENST00000327028 TMEM42Q69YG0 159 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 NR2C2APQ86WQ0 139 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 OR13C9Q8NGT0 318 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 UBASH3BQ8TF42 649 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 PIGTQ969N2 578 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 GFI1Q99684 422 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 TPK1Q9H3S4 243 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 RELNP78509 3460 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 USP9XQ93008 2570 aaPredicted RBP8.8□□□□□ -1
VIPAS39-201ENST00000327028 SMIM30A4D0T7 59 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 WIPF3A6NGB9 483 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 NCR1O76036 304 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 ALX3O95076 343 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 MAS1P04201 325 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 GLRXP35754 106 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 MPV17P39210 176 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 OR10A3P58181 314 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 ZNF718Q3SXZ3 478 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 BEX5Q5H9J7 111 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 CLVS2Q5SYC1 327 aa8.8□□□□□ -1
VIPAS39-201ENST00000327028 CROCCP3Q8IVE0 287 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms