RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 NSMAFQ92636 917 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 C12orf43Q96C57 262 aaKnown RBP2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 PELI1Q96FA3 418 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 MARS2Q96GW9 593 aaKnown RBP2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 PGAM5Q96HS1 289 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 CHST5Q9GZS9 411 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 EGLN1Q9GZT9 426 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 PBOV1Q9GZY1 135 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 IFT22Q9H7X7 185 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 DLL4Q9NR61 685 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 RASSF1Q9NS23 344 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 PAK1IP1Q9NWT1 392 aaPredicted RBP2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 CKLFQ9UBR5 152 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 STUB1Q9UNE7 303 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 PLA2G2DQ9UNK4 145 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 PMF1-BGLAPU3KQ54 211 aa2.83□□□□□ -1.96
SCAMP1-201ENST00000320280 ZGRF1Q86YA3 2104 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SPEGQ15772 3267 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 DMXL1Q9Y485 3027 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR4C45A6NMZ5 311 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 FAM90A27PA6NNH2 459 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SHISA9B4DS77 424 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LYZL6O75951 148 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 IGFBP1P08833 259 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CD79AP11912 226 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 PRF1P14222 555 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 TNFRSF1AP19438 455 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 KLK2P20151 261 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 MPZP25189 248 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 KCNJ3P48549 501 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 MTNR1BP49286 362 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SNRPD2P62316 118 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 PPP1R8Q12972 351 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 C11orf71Q6IPW1 123 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 BAIAP2L2Q6UXY1 529 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 MRPL21Q7Z2W9 205 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR2W3Q7Z3T1 314 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ANKRD13BQ86YJ7 626 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 C1QL4Q86Z23 238 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF584Q8IVC4 421 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 KDM8Q8N371 416 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 Q8NFD4 153 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 BBS1Q8NFJ9 593 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 PXT1Q8NFP0 134 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SEMA6DQ8NFY4 1073 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR8G5Q8NG78 346 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR13G1Q8NGZ3 307 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CNIH3Q8TBE1 160 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SYNPRQ8TBG9 265 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 RAB2BQ8WUD1 216 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 DEDD2Q8WXF8 326 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ACOT12Q8WYK0 555 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 C1orf159Q96HA4 380 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 WFIKKN1Q96NZ8 548 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 MICU1Q9BPX6 476 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 TRAF4Q9BUZ4 470 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 RTL8AQ9BWD3 113 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CXXC4Q9H2H0 198 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CXorf56Q9H5V9 222 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 RAB9BQ9NP90 201 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF701Q9NV72 531 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LPAR3Q9UBY5 353 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 POLDIP2Q9Y2S7 368 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SPTBN4Q9H254 2564 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LAMA1P25391 3075 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 TMEM269A0A1B0GVZ9 245 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LRP5LA4QPB2 252 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ANKRD30BLA7E2S9 258 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OVOL3O00110 214 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SLC22A1O15245 554 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 AKR7A2O43488 359 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 NOL3O60936 208 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CA11O75493 328 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 DIRAS3O95661 229 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 UCHL1P09936 223 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 IGFBP3P17936 291 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 PTBP1P26599 531 aaKnown RBP eCLIP2.82□□□□□ -1.962e-10■■■■■ 42.2
SCAMP1-201ENST00000320280 GNALP38405 381 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 NAA10P41227 235 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 UQCRFS1P47985 274 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 FUT6P51993 359 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF121P58317 390 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 TIGD6Q17RP2 521 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LRRC36Q1X8D7 754 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LIPNQ5VXI9 398 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 FIP1L1Q6UN15 594 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ASCL4Q6XD76 172 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 REC114Q7Z4M0 266 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SERPINA12Q8IW75 414 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 C1orf87Q8N0U7 546 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 RPRMLQ8N4K4 120 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 BPIFB6Q8NFQ5 453 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 KBTBD8Q8NFY9 601 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR51A2Q8NGJ7 313 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR5D14Q8NGL3 314 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR13F1Q8NGS4 319 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 THEM6Q8WUY1 208 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 C4orf36Q96KX1 117 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SLC30A2Q9BRI3 323 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 RAB1BQ9H0U4 201 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms