RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SELEP16581 610 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 TNK1Q13470 666 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 HLXQ14774 488 aaPredicted RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 CTF1Q16619 201 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 MBNL2Q5VZF2 373 aaKnown RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 RGS7BPQ6MZT1 257 aaPredicted RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 PARP16Q8N5Y8 322 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 SEMA6DQ8NFY4 1073 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 KLF14Q8TD94 323 aaPredicted RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 TMEM171Q8WVE6 324 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 RPL3LQ92901 407 aaKnown RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 TMEM106AQ96A25 262 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 SOX7Q9BT81 388 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 NAA50Q9GZZ1 169 aaKnown RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 ZNF442Q9H7R0 627 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 EXOSC4Q9NPD3 245 aaKnown RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 KCNN3Q9UGI6 736 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 GSTK1Q9Y2Q3 226 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 RNF115Q9Y4L5 304 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 UTP20O75691 2785 aaKnown RBP11.69□□□□□ -0.54
PRPF18-201ENST00000320054 ABCA4P78363 2273 aa11.69□□□□□ -0.54
PRPF18-201ENST00000320054 GCN1Q92616 2671 aaKnown RBP11.68□□□□□ -0.54
PRPF18-201ENST00000320054 USP9YO00507 2555 aaPredicted RBP11.68□□□□□ -0.54
PRPF18-201ENST00000320054 LOC100506127A0A0U1RQW1 187 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 GGT3PA6NGU5 568 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 SHISA9B4DS77 424 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 NOL3O60936 208 aaKnown RBP11.68□□□□□ -0.54
PRPF18-201ENST00000320054 KITLGP21583 273 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 ACKR3P25106 362 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 THBS4P35443 961 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 MAGEB1P43366 347 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 SOX2P48431 317 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 ERVS71-1P61550 626 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 RIPPLY1Q0D2K3 151 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 INSL4Q14641 139 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 SPATA46Q5T0L3 261 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 CSNK2A3Q8NEV1 391 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 FGGYQ96C11 551 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 ISOC1Q96CN7 298 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 CMBLQ96DG6 245 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 PIK3IP1Q96FE7 263 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 CENPOQ9BU64 300 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 FAM192AQ9GZU8 254 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 PLEKHA1Q9HB21 404 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 CA10Q9NS85 328 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 ATP23Q9Y6H3 246 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 HRNRQ86YZ3 2850 aaPredicted RBP11.68□□□□□ -0.54
PRPF18-201ENST00000320054 ROS1P08922 2347 aa11.68□□□□□ -0.54
PRPF18-201ENST00000320054 RAI1Q7Z5J4 1906 aaPredicted RBP11.67□□□□□ -0.54
PRPF18-201ENST00000320054 CD300LBA8K4G0 201 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 VSTM5A8MXK1 200 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 IQCF6A8MYZ5 107 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 H3BSH0 61 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 PIN1P1O15428 100 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 LMX1BO60663 402 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 ZNF20P17024 532 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 FSTP19883 344 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 GCH1P30793 250 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 PSG7Q13046 419 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 HSD17B12Q53GQ0 312 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 C22orf42Q6IC83 251 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 ADAM5Q6NVV9 412 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 UTS2BQ765I0 119 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 SERPINA12Q8IW75 414 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 FTMTQ8N4E7 242 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 KBTBD8Q8NFY9 601 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 OR56B2PQ8NGI1 322 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 SYNPRQ8TBG9 265 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 PP6455Q8WZ26 134 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 PIGTQ969N2 578 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 DGCR14Q96DF8 476 aaKnown RBP11.67□□□□□ -0.54
PRPF18-201ENST00000320054 ADAT3Q96EY9 351 aaPredicted RBP11.67□□□□□ -0.54
PRPF18-201ENST00000320054 KCTD7Q96MP8 289 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 NOX4Q9NPH5 578 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 FOXJ3Q9UPW0 622 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 PIGLQ9Y2B2 252 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 ICE1Q9Y2F5 2266 aa11.67□□□□□ -0.54
PRPF18-201ENST00000320054 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 IGLV3-9A0A075B6K5 115 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 TRAV1-2A0A0B4J238 106 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 ZNF816-ZNF321PA0A0X1KG74 233 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 SLC22A1O15245 554 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 ALX3O95076 343 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 CLDN1O95832 211 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 CST4P01036 141 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 IGHV3-13P01766 116 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 FAHP16930 419 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
PRPF18-201ENST00000320054 MPV17P39210 176 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 FABP6P51161 128 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 KLF3P57682 345 aaPredicted RBP11.66□□□□□ -0.54
PRPF18-201ENST00000320054 MSMPQ1L6U9 139 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 FAM27D1Q5T7N8 215 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 TMEM42Q69YG0 159 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 OR2T2Q6IF00 324 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 ZNF529Q6P280 563 aa11.66□□□□□ -0.54
PRPF18-201ENST00000320054 OR5D14Q8NGL3 314 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms