RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TMEM211Q6ICI0 200 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 C11orf87Q6NUJ2 197 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 FAM71CQ8NEG0 241 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 MARCH1Q8TCQ1 289 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 DNASE2BQ8WZ79 361 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 MMP24Q9Y5R2 645 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TMED7-TICAM2A0A0A6YYA0 188 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 SCGB1C2P0DMR2 95 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 IAPPP10997 89 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 PMS2P11Q13670 270 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 C19orf35Q6ZS72 473 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 BATF2Q8N1L9 274 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 OR5M1Q8NGP8 315 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 OR1N1Q8NGS0 311 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TRAF4Q9BUZ4 470 aaPredicted RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 DCAF16Q9NXF7 216 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 PPT2Q9UMR5 302 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TMED7Q9Y3B3 224 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TRIP12Q14669 1992 aaPredicted RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 TRGV8A0A0C4DH27 118 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 GALR3O60755 368 aaPredicted RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 FCARP24071 287 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 PPP1CBP62140 327 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 LINC00303Q3SY05 128 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 MIDNQ504T8 468 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 VWA1Q6PCB0 445 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TMEM179BQ7Z7N9 219 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 RIMKLAQ8IXN7 391 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 OR2I1PQ8NGU4 316 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 RHNO1Q9BSD3 238 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 LOC102723971A0A1B0GUV8 181 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 NXPH2O95156 264 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 HLXQ14774 488 aaPredicted RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 SLCO4C1Q6ZQN7 724 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 NHLRC2Q8NBF2 726 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 TP53I13Q8NBR0 393 aaPredicted RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 OR4C16Q8NGL9 310 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 CORO2AQ92828 525 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 Q96M85 177 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 SLC46A1Q96NT5 459 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 OR5V1Q9UGF6 321 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 MRPL33O75394 65 aaKnown RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 HSBP1O75506 76 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 CTSLP07711 333 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 SLC25A6P12236 298 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 CCKARP32238 428 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 RAB7AP51149 207 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 CD300CQ08708 224 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 GLDNQ6ZMI3 551 aaPredicted RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 OR2W3Q7Z3T1 314 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 PGBD5Q8N414 524 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 SLC39A7Q92504 469 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 MUCL1Q96DR8 90 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 HINT3Q9NQE9 182 aaKnown RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 KLK11Q9UBX7 282 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 PPP1R3CQ9UQK1 317 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 NTNG1Q9Y2I2 539 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 COA3Q9Y2R0 106 aaPredicted RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 C19orf67A6NJJ6 358 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 IFITM5A6NNB3 132 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 LEUTXA8MZ59 168 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 EFSO43281 561 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 UTS2O95399 124 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 ZNF25P17030 456 aaPredicted RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 MAT1AQ00266 395 aaKnown RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 NCMAPQ5T1S8 102 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 TRNP1Q6NT89 227 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 GOT1L1Q8NHS2 421 aaPredicted RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 NUDCD2Q8WVJ2 157 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 DYRK2Q92630 601 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 LINC00052Q96N35 136 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 MS4A10Q96PG2 267 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 USB1Q9BQ65 265 aaKnown RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 NMES1Q9C002 83 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 PDFQ9HBH1 243 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 DUSP22Q9NRW4 184 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 SIRT3Q9NTG7 399 aaPredicted RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 BET1LQ9NYM9 111 aa7.4□□□□□ -1.22
VPS41-202ENST00000310301 DHCR7Q9UBM7 475 aaKnown RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 RCL1Q9Y2P8 373 aaKnown RBP7.4□□□□□ -1.22
VPS41-202ENST00000310301 PYCARD-AS1I3L0S3 204 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 HS3ST1O14792 307 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 GSTP1P09211 210 aaKnown RBP7.4□□□□□ -1.23
VPS41-202ENST00000310301 XKR7Q5GH72 579 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 TMEM81Q6P7N7 255 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 ZNF355PQ9NSJ1 428 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 IGHV1OR21-1A0A087WYE8 117 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 LOC107986453A0A1B0GWG9 222 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 AP4M1O00189 453 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 BMPR1BO00238 502 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 CT45A10P0DMU9 189 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 NAT2P11245 290 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 SLC25A4P12235 298 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 TBPP20226 339 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 GALR1P47211 349 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 MMP15P51511 669 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 PFN3P60673 137 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 ISXQ2M1V0 245 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 ZNF718Q3SXZ3 478 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 JMJD6Q6NYC1 403 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms