RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZIC3O60481 467 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 FCGR2AP12318 317 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 RAB6AP20340 208 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 ADH6P28332 368 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 DSCR4P56555 118 aaPredicted RBP10.17□□□□□ -0.78
PTPN2-201ENST00000309660 NKAPLQ5M9Q1 402 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 GJC3Q8NFK1 279 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 OR9K2Q8NGE7 335 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 MOB1AQ9H8S9 216 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 PNRC2Q9NPJ4 139 aaKnown RBP10.17□□□□□ -0.78
PTPN2-201ENST00000309660 PRRC2CQ9Y520 2896 aaKnown RBP10.17□□□□□ -0.78
PTPN2-201ENST00000309660 OR5H14A6NHG9 310 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 CDC14BO60729 498 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 DKK1O94907 266 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 ZNF17P17021 662 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 PLAC9Q5JTB6 97 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 PLXDC2Q6UX71 529 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 DOK3Q7L591 496 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 DEFB123Q8N688 67 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 ESX1Q8N693 406 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 KCNG3Q8TAE7 436 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 SRXN1Q9BYN0 137 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 NELFAQ9H3P2 528 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 ZNF701Q9NV72 531 aaPredicted RBP10.17□□□□□ -0.78
PTPN2-201ENST00000309660 PIGLQ9Y2B2 252 aa10.17□□□□□ -0.78
PTPN2-201ENST00000309660 A0A0A6YYD4 124 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 IGKV1-9A0A0C4DH69 117 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 M0R135 149 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 CXCL13O43927 109 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 KISS1Q15726 138 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 WIPI1Q5MNZ9 446 aaPredicted RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 FAM74A1Q5RGS3 127 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 LY6G6FQ5SQ64 297 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 LYPD6Q86Y78 171 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 ZNF799Q96GE5 643 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 NAA11Q9BSU3 229 aaPredicted RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 NARFLQ9H6Q4 476 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 RHBDD3Q9Y3P4 386 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 LOC102723996A0A087X1L8 192 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 H3BUI4 141 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 SSX5O60225 188 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 B4GALT1P15291 398 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 AMY2BP19961 511 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 GABRR1P24046 479 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 BLVRBP30043 206 aaPredicted RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 OR3A2P47893 321 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 GRB2P62993 217 aaKnown RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 CSNK2A1P68400 391 aaPredicted RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 SLC9A3R2Q15599 337 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 AANATQ16613 207 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 PGAP1Q75T13 922 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 MAML2Q8IZL2 1156 aaPredicted RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 BATF2Q8N1L9 274 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 ANGPTL4Q9BY76 406 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 PROK2Q9HC23 129 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 CRLF2Q9HC73 371 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 FANCFQ9NPI8 374 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 PADI1Q9ULC6 663 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 OR14I1A6ND48 311 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 EIF1BO60739 113 aaKnown RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 RFPL3SP0C7P2 107 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 ZNF84P51523 738 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 QRFPP83859 136 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 SRYQ05066 204 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 C9orf135Q5VTT2 229 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 WDR5BQ86VZ2 330 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 DTX1Q86Y01 620 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 BOLLQ8N9W6 283 aaKnown RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 ADPRHL1Q8NDY3 354 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 PPP1R1CQ8WVI7 109 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 PTX4Q96A99 478 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 GUCD1Q96NT3 240 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 URM1Q9BTM9 101 aaKnown RBP10.16□□□□□ -0.78
PTPN2-201ENST00000309660 ZNF700Q9H0M5 742 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 GPR173Q9NS66 373 aa10.16□□□□□ -0.78
PTPN2-201ENST00000309660 FAM230AA0A1W2PPH8 454 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 TMEM14DPA8MWL7 114 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 ANGPTL7O43827 346 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 RAD51DO75771 328 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 CD74P04233 296 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 CAMK2BQ13554 666 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 GK2Q14410 553 aaPredicted RBP10.15□□□□□ -0.78
PTPN2-201ENST00000309660 MICBQ29980 383 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 C1orf210Q8IVY1 113 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 AKR7LQ8NHP1 331 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 PAQR8Q8TEZ7 354 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 PIGQQ9BRB3 760 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 ZNF471Q9BX82 626 aaPredicted RBP10.15□□□□□ -0.78
PTPN2-201ENST00000309660 CCDC163A0A0D9SF12 145 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 CBR3O75828 277 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 RLN2P04090 185 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 LCATP04180 440 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 TMEM225BP0DP42 221 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 NR2C1P13056 603 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 HIST1H1DP16402 221 aaKnown RBP10.15□□□□□ -0.78
PTPN2-201ENST00000309660 CASRP41180 1078 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 ATP1B3P54709 279 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 CARD18P57730 90 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 MC2RQ01718 297 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 ENDOGQ14249 297 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms