RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ATG4DQ86TL0 474 aaPredicted RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 C1QL4Q86Z23 238 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 ELOA3Q8NG57 546 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR1J2Q8NGS2 313 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR6N2Q8NGY6 317 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 TSEN15Q8WW01 171 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 INTS14Q96SY0 518 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF471Q9BX82 626 aaPredicted RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 GRHPRQ9UBQ7 328 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 TRBV11-1A0A0K0K1C0 115 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 TVP23AA6NH52 213 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 HCRTR2O43614 444 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 AMY2AP04746 511 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 PAX1P15863 534 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 RPS2P15880 293 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 HIST1H1BP16401 226 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 DLSTP36957 453 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 NPBWR1P48145 328 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 IL11RAQ14626 422 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 MESTQ5EB52 335 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 GALNT16Q8N428 558 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR10H5Q8NGA6 315 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 OIT3Q8WWZ8 545 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZBTB8AQ96BR9 441 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF75AQ96N20 296 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 MMP25Q9NPA2 562 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 SLC2A8Q9NY64 477 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 PTRH2Q9Y3E5 179 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 MUC6Q6W4X9 2439 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 URB1O60287 2271 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 VSTM2BA6NLU5 285 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 SULT2B1O00204 365 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 NUDT14O95848 222 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 IL2RAP01589 272 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 CBR1P16152 277 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 FBXW4P57775 412 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 RPS18P62269 152 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 MEF2DQ14814 521 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 SLC17A1Q14916 467 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 TAF13Q15543 124 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 HMGN3Q15651 99 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 TMEM244Q5VVB8 128 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 MRPL14Q6P1L8 145 aaKnown RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 NDUFAF7Q7L592 441 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 DPY19L4Q7Z388 723 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 TMED4Q7Z7H5 227 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 SLC25A42Q86VD7 318 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 TMEM200AQ86VY9 491 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 NFAM1Q8NET5 270 aaPredicted RBP9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 OTOSQ8NHW6 89 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 ASB17Q8WXJ9 295 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 HIST1H2BAQ96A08 127 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR8B4Q96RC9 309 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 CMKLR1Q99788 373 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 MMP26Q9NRE1 261 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 PISDQ9UG56 409 aa9.18□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF736B4DX44 427 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 TSTD3H0UI37 97 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 M0QYG6 137 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 SLC25A12O75746 678 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 CYB5AP00167 134 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF14P17017 642 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 FSTP19883 344 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZBTB25P24278 435 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 BDKRB2P30411 391 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 CCKBRP32239 447 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 CASRP41180 1078 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 BPIFB3P59826 476 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 INPP5JQ15735 1006 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 CPEB2Q7Z5Q1 589 aaKnown RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 LYG2Q86SG7 212 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 BPIFB2Q8N4F0 458 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 C10orf53Q8N6V4 93 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR1S2Q8NGQ3 325 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR13C8Q8NGS7 320 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 STOML3Q8TAV4 291 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 RNF128Q8TEB7 428 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 RAB24Q969Q5 203 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 PTX4Q96A99 478 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 TSPAN32Q96QS1 320 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF587Q96SQ5 575 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 LPAR4Q99677 370 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 TLNRD1Q9H1K6 362 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 KCNK15Q9H427 330 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 NOP16Q9Y3C1 178 aaKnown RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF292O60281 2723 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 PRRC2CQ9Y520 2896 aaKnown RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 F8VVB4 439 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 F8VWA3 439 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 LDLRAD4O15165 306 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF264O43296 627 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR2T1O43869 369 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 TSPAN2O60636 221 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 CD2P06729 351 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 IGFBP3P17936 291 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 HTR2CP28335 458 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 PPT1P50897 306 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF117Q03924 483 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 SKP2Q13309 424 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms