RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 DHRS7CA6NNS2 312 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 MT-CO2P00403 227 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 DBIP07108 87 aaKnown RBP9.41□□□□□ -0.9
MSRB3-201ENST00000308259 DPTQ07507 201 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 AMZ1Q400G9 498 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 DEFB134Q4QY38 66 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 ZNF66Q6ZN08 573 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 SMRP1Q8NCR6 262 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 LMX1AQ8TE12 382 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 WWTR1Q9GZV5 400 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 RNF212BA8MTL3 300 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 FAM171A2A8MVW0 826 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 FZD5Q13467 585 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 TRMT12Q53H54 448 aaKnown RBP9.41□□□□□ -0.9
MSRB3-201ENST00000308259 ZNF485Q8NCK3 441 aa9.41□□□□□ -0.9
MSRB3-201ENST00000308259 LCORQ96JN0 433 aaPredicted RBP9.41□□□□□ -0.9
MSRB3-201ENST00000308259 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 LDB3O75112 727 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 EML2O95834 649 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 GPANK1O95872 356 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HLA-DQA2P01906 255 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 ZGLP1P0C6A0 271 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 AK4P27144 223 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 RAB28P51157 221 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 ARHGAP19Q14CB8 494 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 SLC24A4Q8NFF2 622 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 OR6N1Q8NGY5 312 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 IL22RA2Q969J5 263 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 COX14Q96I36 57 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HDAC8Q9BY41 377 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 CACFD1Q9UGQ2 172 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 ZNF780BQ9Y6R6 833 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 XRCC3O43542 346 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 GSTZ1O43708 216 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 PEBP1P30086 187 aaKnown RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 DRD3P35462 400 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 YPEL5P62699 121 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 SHC2P98077 582 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 CD300LDQ6UXZ3 194 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 ZNF620Q6ZNG0 422 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 ZNF761Q86XN6 746 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 TOMM40LQ969M1 308 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 RNF2Q99496 336 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 CMKLR1Q99788 373 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 SLC35B3Q9H1N7 401 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 OR52D1Q9H346 318 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 MDC1Q14676 2089 aaKnown RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BKO60814 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 TTRP02766 147 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BJP06899 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BOP23527 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BBP33778 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 RAB7AP51149 207 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BDP58876 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BCP62807 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 TLE3Q04726 772 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST2H2BEQ16778 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 KIAA0895LQ68EN5 471 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 WDR74Q6RFH5 385 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 SELENOHQ8IZQ5 122 aaKnown RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 EXD3Q8N9H8 876 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BHQ93079 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BNQ99877 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H2BMQ99879 126 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 SLC25A21Q9BQT8 299 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 TIMM29Q9BSF4 260 aa9.4□□□□□ -0.9
MSRB3-201ENST00000308259 BARX1Q9HBU1 254 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-201ENST00000308259 SCGB2A1O75556 95 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 CLEC3AO75596 197 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 IGHA1P01876 353 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 CHRNB4P30926 498 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 HOXA6P31267 233 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 DUSP5Q16690 384 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 GXYLT1Q4G148 440 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 VWA2Q5GFL6 755 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 SLC48A1Q6P1K1 146 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 ZNF813Q6ZN06 617 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 SAT2Q96F10 170 aaPredicted RBP9.4□□□□□ -0.91
MSRB3-201ENST00000308259 DIRC2Q96SL1 478 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 ZNF2Q9BSG1 426 aaPredicted RBP9.4□□□□□ -0.91
MSRB3-201ENST00000308259 PCED1AQ9H1Q7 454 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 BCL2L10Q9HD36 194 aa9.4□□□□□ -0.91
MSRB3-201ENST00000308259 TRANK1O15050 2925 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 FITM1A5D6W6 292 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 TNFSF4P23510 183 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 TDGF1P3P51864 188 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 ZNF345Q14585 488 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 AWAT2Q6E213 333 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 Q7L0L9 218 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 CCL4L1Q8NHW4 92 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 SFXN5Q8TD22 340 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 SLC7A11Q9UPY5 501 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 A8MXE2 369 aa9.39□□□□□ -0.91
MSRB3-201ENST00000308259 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
MSRB3-201ENST00000308259 CER1O95813 267 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms