RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ZNF784Q8NCA9 323 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 OR5M8Q8NGP6 311 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 AKR7LQ8NHP1 331 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 RPUSD4Q96CM3 377 aaKnown RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 PMS2P1A4D2B8 440 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 PDGFBP01127 241 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 ARHGEF39Q8N4T4 335 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 GPR32P1Q8NGA4 272 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 SPACA9Q96E40 222 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 IP6K3Q96PC2 410 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 ALKBH3Q96Q83 286 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 GINS3Q9BRX5 216 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 ACTR3CQ9C0K3 210 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 PPIL1Q9Y3C6 166 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 C2CD4DB7Z1M9 353 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 SHISA8B8ZZ34 492 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 CBR3O75828 277 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 CRYBB2P43320 205 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 OR2B8PP59922 312 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 INSL4Q14641 139 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 TP53I13Q8NBR0 393 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 PSENENQ9NZ42 101 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 TRAPPC4Q9Y296 219 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 IL2RAP01589 272 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 ATF1P18846 271 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 DTWD2Q8NBA8 298 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 MMP25Q9NPA2 562 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 M0R1B8 84 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 RRP8O43159 456 aaKnown RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 FABP1P07148 127 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 KDF1Q8NAX2 398 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 SOX7Q9BT81 388 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 TINAGL1Q9GZM7 467 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 RP1P56715 2156 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 DOCK2Q92608 1830 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 LMO7DNF2Z398 122 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 GLULP15104 373 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 GABRG2P18507 467 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 GLDNQ6ZMI3 551 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-201ENST00000303531 ASB13Q8WXK3 278 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 SERGEFQ9UGK8 458 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 FBXO4Q9UKT5 387 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 RNF150Q9ULK6 438 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-201ENST00000303531 RPL11P62913 178 aaKnown RBP12.54□□□□□ -0.4
PRKCB-201ENST00000303531 DHODHQ02127 395 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 RTL8BQ17RB0 113 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 PNLIPRP3Q17RR3 467 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
PRKCB-201ENST00000303531 RXFP4Q8TDU9 374 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 ATP23Q9Y6H3 246 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 CRYAAP02489 173 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 AANATQ16613 207 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 TEX261Q6UWH6 196 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF485Q8NCK3 441 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 U3KQ87 197 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 NKX2-2O95096 273 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 ABCD3P28288 659 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 Q6ZS52 159 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 BPIFCQ8NFQ6 507 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF90Q03938 601 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 ACOT6Q3I5F7 207 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-201ENST00000303531 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-201ENST00000303531 SARAFQ96BY9 339 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 SERPINE3A8MV23 424 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 PTHLHP12272 177 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 TCTN1Q2MV58 587 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 CDONQ4KMG0 1287 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 OR2V1Q8NHB1 315 aa12.54□□□□□ -0.4
PRKCB-201ENST00000303531 TGM1P22735 817 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 THBS4P35443 961 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 RAB13P51153 203 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 PCBP4P57723 403 aaKnown RBP12.53□□□□□ -0.4
PRKCB-201ENST00000303531 CCL7P80098 99 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF117Q03924 483 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 ANGPTL7O43827 346 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 GPR3P46089 330 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 CEACAM16Q2WEN9 425 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 TMEM128Q5BJH2 165 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 TRILQ7L0X0 811 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 LINC01555Q8NAE3 123 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 CORO2AQ92828 525 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 RCL1Q9Y2P8 373 aaKnown RBP12.53□□□□□ -0.4
PRKCB-201ENST00000303531 NHSQ6T4R5 1651 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 PRRG2O14669 202 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
PRKCB-201ENST00000303531 AQP8O94778 261 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 AVPR2P30518 371 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 FUT6P51993 359 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 TMEM88Q6PEY1 159 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF683Q8IZ20 524 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
PRKCB-201ENST00000303531 METTL12A8MUP2 240 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms