RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 OR14I1A6ND48 311 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 GGT3PA6NGU5 568 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 CENPXA8MT69 81 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 E9PLN8 166 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 SCGNO76038 276 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 DBHP09172 617 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 GSTT2BP0CG30 244 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 PRF1P14222 555 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 MPGP29372 298 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 ARR3P36575 388 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 AP3S2P59780 193 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 SSBP1Q04837 148 aaKnown RBP10.47□□□□□ -0.73
TPM3-202ENST00000302206 GPR176Q14439 515 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 FBXW9Q5XUX1 488 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 TMEM53Q6P2H8 277 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.47□□□□□ -0.73
TPM3-202ENST00000302206 OR2W3Q7Z3T1 314 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 NAA40Q86UY6 237 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 OR5AS1Q8N127 324 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 CELF2-AS1Q8N7Q2 184 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 DTX3Q8N9I9 347 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 OR52N4Q8NGI2 321 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 OR13C9Q8NGT0 318 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 AKR7LQ8NHP1 331 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 FGFBP3Q8TAT2 258 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 SSC4DQ8WTU2 575 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 FCAMRQ8WWV6 532 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 SGK3Q96BR1 496 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 NUDT16L1Q9BRJ7 211 aaKnown RBP10.47□□□□□ -0.73
TPM3-202ENST00000302206 RAB22AQ9UL26 194 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 CACNG2Q9Y698 323 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 DOPEY2Q9Y3R5 2298 aa10.47□□□□□ -0.73
TPM3-202ENST00000302206 CIB4A0PJX0 185 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 NAP1L6A6NFF2 107 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 AHRRA9YTQ3 701 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 SULT1C2O00338 296 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 CNOT4O95628 575 aaKnown RBP10.46□□□□□ -0.73
TPM3-202ENST00000302206 CD3GP09693 182 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 UBBP0CG47 229 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 ABOP16442 354 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 ANOS1P23352 680 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 SLC6A1P30531 599 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 ZNF93P35789 620 aaPredicted RBP10.46□□□□□ -0.73
TPM3-202ENST00000302206 EFNB2P52799 333 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 KLF9Q13886 244 aaPredicted RBP10.46□□□□□ -0.73
TPM3-202ENST00000302206 SF3B4Q15427 424 aaKnown RBP eCLIP10.46□□□□□ -0.731e-13■■□□□ 12.6
TPM3-202ENST00000302206 GUSBP1Q15486 140 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 FAM189A2Q15884 450 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 PABPC1L2AQ5JQF8 200 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 ZBTB37Q5TC79 503 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 RAB12Q6IQ22 244 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 PLET1Q6UQ28 207 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 COLCA1Q6ZS62 124 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 P4HA3Q7Z4N8 544 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 IZUMO1Q8IYV9 350 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 TOMM5Q8N4H5 51 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 SNRNP27Q8WVK2 155 aaKnown RBP10.46□□□□□ -0.73
TPM3-202ENST00000302206 AKAP1Q92667 903 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM3-202ENST00000302206 WNT2BQ93097 391 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 PHF21AQ96BD5 680 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 MARVELD1Q9BSK0 173 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 C1QTNF5Q9BXJ0 243 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 CHST5Q9GZS9 411 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 CNTD2Q9H8S5 307 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 RNF121Q9H920 327 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 NEK6Q9HC98 313 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 ZNF224Q9NZL3 707 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 COPZ2Q9P299 210 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 GHRLQ9UBU3 117 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 N6AMT1Q9Y5N5 214 aa10.46□□□□□ -0.73
TPM3-202ENST00000302206 USP9XQ93008 2570 aaPredicted RBP10.45□□□□□ -0.74
TPM3-202ENST00000302206 C5orf63A6NC05 138 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 METTL21EPA6NDL7 271 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 XRCC2O43543 280 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 ORC5O43913 435 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 IGHV3-9P01782 118 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 LCATP04180 440 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 TRAPPC2P0DI81 140 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 TRAPPC2BP0DI82 140 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 TMIGD3P0DMS9 266 aaPredicted RBP10.45□□□□□ -0.74
TPM3-202ENST00000302206 GDNFP39905 211 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 ALDH3B1P43353 468 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 GSK3AP49840 483 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 BTG1P62324 171 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 QRFPP83859 136 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 FAPQ12884 760 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 PLA2G7Q13093 441 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 SNAI3Q3KNW1 292 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 PLA1AQ53H76 456 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 AGAP6Q5VW22 663 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 OR2A2Q6IF42 318 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 PLXDC2Q6UX71 529 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 CCDC36Q8IYA8 594 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 UBE2J2Q8N2K1 259 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 SEMA6DQ8NFY4 1073 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 OR4D6Q8NGJ1 314 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 OR1K1Q8NGR3 316 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 OR52I2Q8NH67 350 aa10.45□□□□□ -0.74
TPM3-202ENST00000302206 NANOS1Q8WY41 292 aaKnown RBP10.45□□□□□ -0.74
TPM3-202ENST00000302206 SLC7A6Q92536 515 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms