RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 FBXW5Q969U6 566 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 SPSB1Q96BD6 273 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 NRTNQ99748 197 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 CXCL13O43927 109 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 OR2C1O95371 312 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 MYBPHQ13203 477 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 TESK1Q15569 626 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 TRILQ7L0X0 811 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 OR11L1Q8NGX0 322 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 MOGAT1Q96PD6 335 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 VN1R1Q9GZP7 353 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 CHST6Q9GZX3 395 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 ARV1Q9H2C2 271 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 ST3GAL6Q9Y274 331 aa17.34■□□□□ 0.37
TSR1-201ENST00000301364 OTOL1A6NHN0 477 aaPredicted RBP17.33■□□□□ 0.37
TSR1-201ENST00000301364 EPPINO95925 133 aa17.33■□□□□ 0.37
TSR1-201ENST00000301364 DHODHQ02127 395 aa17.33■□□□□ 0.37
TSR1-201ENST00000301364 TCTN1Q2MV58 587 aa17.33■□□□□ 0.37
TSR1-201ENST00000301364 ZNF770Q6IQ21 691 aaPredicted RBP17.33■□□□□ 0.37
TSR1-201ENST00000301364 TMEM91Q6ZNR0 172 aa17.33■□□□□ 0.37
TSR1-201ENST00000301364 ZNF573Q86YE8 665 aa17.33■□□□□ 0.37
TSR1-201ENST00000301364 SPEM1Q8N4L4 309 aa17.33■□□□□ 0.37
TSR1-201ENST00000301364 THOC3Q96J01 351 aaKnown RBP17.33■□□□□ 0.37
TSR1-201ENST00000301364 HS3ST1O14792 307 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 TNFSF14O43557 240 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 FAHP16930 419 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 ADIRFQ15847 76 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 NPEPL1Q8NDH3 523 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 VSTM2LQ96N03 204 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 TECTBQ96PL2 329 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 GPA33Q99795 319 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 HEYLQ9NQ87 328 aaPredicted RBP17.33■□□□□ 0.36
TSR1-201ENST00000301364 DCTN6O00399 190 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 HOXA1P49639 335 aaPredicted RBP17.33■□□□□ 0.36
TSR1-201ENST00000301364 CBLN3Q6UW01 205 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 C1orf87Q8N0U7 546 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 OSR2Q8N2R0 312 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 OR2AE1Q8NHA4 323 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 PHYHIPLQ96FC7 376 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 RAB18Q9NP72 206 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 ICAM5Q9UMF0 924 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 LSM2Q9Y333 95 aaKnown RBP17.33■□□□□ 0.36
TSR1-201ENST00000301364 MDFIC2A0A1B0GVS7 189 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 SULT1A3P0DMM9 295 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 SULT1A4P0DMN0 295 aa17.33■□□□□ 0.36
TSR1-201ENST00000301364 A0A1B0GTH9 108 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 HIST1H1DP16402 221 aaKnown RBP17.32■□□□□ 0.36
TSR1-201ENST00000301364 THBS3P49746 956 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 RPP25Q9BUL9 199 aaKnown RBP17.32■□□□□ 0.36
TSR1-201ENST00000301364 PCDHB10Q9UN67 800 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 IGHV5-51A0A0C4DH38 117 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 NXPH3O95157 252 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 CD96P40200 585 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 FUT7Q11130 342 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 C1QCP02747 245 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 SELEP16581 610 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 FUT6P51993 359 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 FMODQ06828 376 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 CLN3Q13286 438 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.32■□□□□ 0.36
TSR1-201ENST00000301364 ZNF275Q9NSD4 429 aaPredicted RBP17.32■□□□□ 0.36
TSR1-201ENST00000301364 FIGNL2A6NMB9 653 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 CYB5BO43169 146 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 HYAL3O43820 417 aaPredicted RBP17.32■□□□□ 0.36
TSR1-201ENST00000301364 CDAP32320 146 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 DSCR4P56555 118 aaPredicted RBP17.32■□□□□ 0.36
TSR1-201ENST00000301364 OR8G2PQ6IF36 304 aa17.32■□□□□ 0.36
TSR1-201ENST00000301364 ZNF816-ZNF321PA0A0X1KG74 233 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 ADAM10O14672 748 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 PIAS2O75928 621 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 HYAL1Q12794 435 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 COMMD1Q8N668 190 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 RHOFQ9HBH0 211 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 FAM60AQ9NP50 221 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 FAM221AA4D161 298 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 CBR1P16152 277 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 LSM11P83369 360 aaKnown RBP eCLIP17.31■□□□□ 0.36
TSR1-201ENST00000301364 PPP1R1AQ13522 171 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 CADM4Q8NFZ8 388 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 PPP1R3EQ9H7J1 279 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 CES1P1Q9UKY3 287 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 C2CD4DB7Z1M9 353 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 COL9A1P20849 921 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 SLC25A26Q70HW3 274 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 C9orf62Q8N4C0 152 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 UBE2ZQ9H832 354 aaPredicted RBP17.31■□□□□ 0.36
TSR1-201ENST00000301364 S100A8P05109 93 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 CTLA4P16410 223 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 ZNF239Q16600 458 aaKnown RBP17.31■□□□□ 0.36
TSR1-201ENST00000301364 NIT2Q9NQR4 276 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 URGCP-MRPS24S4R325 110 aa17.31■□□□□ 0.36
TSR1-201ENST00000301364 TRIP12Q14669 1992 aaPredicted RBP17.31■□□□□ 0.36
TSR1-201ENST00000301364 HSBP1L1C9JCN9 74 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 PLPP3O14495 311 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 Q6ZS52 159 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 ATG4DQ86TL0 474 aaPredicted RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 OR5AP2Q8NGF4 316 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 C12orf49Q9H741 205 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 PCOLCE2Q9UKZ9 415 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms