RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZNF806P0C7X5 589 aa12.78□□□□□ -0.36
SMG8-201ENST00000300917 HTR5AP47898 357 aa12.78□□□□□ -0.36
SMG8-201ENST00000300917 NLRC3Q7RTR2 1065 aa12.78□□□□□ -0.36
SMG8-201ENST00000300917 ZNF584Q8IVC4 421 aa12.78□□□□□ -0.36
SMG8-201ENST00000300917 C20orf196Q8IYI0 205 aa12.78□□□□□ -0.36
SMG8-201ENST00000300917 PNPLA2Q96AD5 504 aa12.78□□□□□ -0.36
SMG8-201ENST00000300917 FCGR2AP12318 317 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 GABRA1P14867 456 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 CSRP2Q16527 193 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 TSPO2Q5TGU0 170 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 H3F3CQ6NXT2 135 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 C15orf40Q8WUR7 153 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 SLC23A1Q9UHI7 598 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 RHBDD3Q9Y3P4 386 aa12.77□□□□□ -0.36
SMG8-201ENST00000300917 LDLRAD4O15165 306 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 ANGPTL7O43827 346 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 LSM6P62312 80 aaKnown RBP12.77□□□□□ -0.37
SMG8-201ENST00000300917 RBMS2Q15434 407 aaKnown RBP12.77□□□□□ -0.37
SMG8-201ENST00000300917 UBE2V2Q15819 145 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 ZNF239Q16600 458 aaKnown RBP12.77□□□□□ -0.37
SMG8-201ENST00000300917 C10orf128Q5T292 105 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 LIN54Q6MZP7 749 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 TUSC5Q8IXB3 177 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 BPIFB2Q8N4F0 458 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 OR8H1Q8NGG4 311 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 OR14K1Q8NGZ2 314 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 TNFAIP8L1Q8WVP5 186 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 LOXL4Q96JB6 756 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 TTTY12Q9BZ98 90 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 PARD6AQ9NPB6 346 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 DLL4Q9NR61 685 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 RAB22AQ9UL26 194 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 FAM230AA0A1W2PPH8 454 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 CREBL2O60519 120 aaPredicted RBP12.77□□□□□ -0.37
SMG8-201ENST00000300917 SULT1A3P0DMM9 295 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 SULT1A4P0DMN0 295 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 ZNF81P51508 661 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 TNK1Q13470 666 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 METTL11BQ5VVY1 283 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 GLDNQ6ZMI3 551 aaPredicted RBP12.77□□□□□ -0.37
SMG8-201ENST00000300917 DOK3Q7L591 496 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 LYPD6Q86Y78 171 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 FOXB1Q99853 325 aa12.77□□□□□ -0.37
SMG8-201ENST00000300917 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.37
SMG8-201ENST00000300917 NOSIPQ9Y314 301 aaKnown RBP12.77□□□□□ -0.37
SMG8-201ENST00000300917 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 PMP2P02689 132 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 NR2C1P13056 603 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 PMP22Q01453 160 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 C9orf62Q8N4C0 152 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 TMEM251Q8N6I4 163 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 SNAPC3Q92966 411 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 SLC6A7Q99884 636 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 FAM173AQ9BQD7 235 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 POFUT1Q9H488 388 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 ZNF780AO75290 641 aaPredicted RBP12.76□□□□□ -0.37
SMG8-201ENST00000300917 ACKR3P25106 362 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 GFRA1P56159 465 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 SCAND1P57086 179 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 ACTBP60709 375 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 ACTG1P63261 375 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 CXADRP78310 365 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 KISS1Q15726 138 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 KCNMB1Q16558 191 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.76□□□□□ -0.37
SMG8-201ENST00000300917 MUC20Q8N307 709 aaPredicted RBP12.76□□□□□ -0.37
SMG8-201ENST00000300917 FOXRED1Q96CU9 486 aaPredicted RBP12.76□□□□□ -0.37
SMG8-201ENST00000300917 ADGRG7Q96K78 797 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 GPR87Q9BY21 358 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 OR51B6Q9H340 312 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 ZNF703Q9H7S9 590 aaPredicted RBP12.76□□□□□ -0.37
SMG8-201ENST00000300917 IFT46Q9NQC8 304 aa12.76□□□□□ -0.37
SMG8-201ENST00000300917 SPENQ96T58 3664 aaKnown RBP12.76□□□□□ -0.37
SMG8-201ENST00000300917 MUC6Q6W4X9 2439 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 LOC390937A0A1W2PQ73 354 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 MRPL33O75394 65 aaKnown RBP12.75□□□□□ -0.37
SMG8-201ENST00000300917 SKA3Q8IX90 412 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 ARMC10Q8N2F6 343 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 SGK3Q96BR1 496 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 RADILQ96JH8 1075 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 CDC6Q99741 560 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 TMEM59Q9BXS4 323 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 C12orf49Q9H741 205 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 MOB1AQ9H8S9 216 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 TMEM38BQ9NVV0 291 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 TAS2R8Q9NYW2 309 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
SMG8-201ENST00000300917 PRELID1Q9Y255 219 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 LIPGQ9Y5X9 500 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 GOSR2O14653 212 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 NKX2-8O15522 239 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 SPRY1O43609 319 aaPredicted RBP12.75□□□□□ -0.37
SMG8-201ENST00000300917 HTR2BP41595 481 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 TAS2R19P59542 299 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 PSG4Q00888 419 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 POU4F3Q15319 338 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms