RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CXCL12P48061 93 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 ATP1B3P54709 279 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 GABREP78334 506 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 PHF19Q5T6S3 580 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 TMEM41AQ96HV5 264 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 DNTTIP1Q9H147 329 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 FN3KRPQ9HA64 309 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 TAS2R3Q9NYW6 316 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 IGHV3-15A0A0B4J1V0 119 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 MASP2O00187 686 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 BPNT1O95861 308 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 ERCC1P07992 297 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF17P17021 662 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 ZBTB25P24278 435 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 IL13RA1P78552 427 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 MEF2DQ14814 521 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF385CQ66K41 422 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-204ENST00000300862 OR5AS1Q8N127 324 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 OR4K17Q8NGC6 315 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 OR10R2Q8NGX6 335 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 RNF138Q8WVD3 245 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 PPP1R1CQ8WVI7 109 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF75AQ96N20 296 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 PRRT1Q99946 306 aa11.4□□□□□ -0.58
HIF3A-204ENST00000300862 C9orf170A2RU37 121 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 EEF1E1-BLOC1S5C9J1V9 151 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 ETV2O00321 342 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 HCKP08631 526 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 H2AFB1P0C5Y9 115 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 CX3CR1P49238 355 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 GPR85P60893 370 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 SGCAQ16586 387 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 HFEQ30201 348 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 PLAC9Q5JTB6 97 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 JMJD6Q6NYC1 403 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 LYG2Q86SG7 212 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 SLC25A42Q86VD7 318 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 PPP1R3BQ86XI6 285 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 MARCH1Q8TCQ1 289 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 SPACA9Q96E40 222 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 LIN37Q96GY3 246 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 LPAR5Q9H1C0 372 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 MRPS28Q9Y2Q9 187 aaKnown RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 TMEM14DPA8MWL7 114 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 IFNA6P05013 189 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 PI3P19957 117 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 CNR1P21554 472 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 RPL35P42766 123 aaKnown RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 CLDN17P56750 224 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 SLC25A53Q5H9E4 307 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 SLC25A47Q6Q0C1 308 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 BOLLQ8N9W6 283 aaKnown RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 NARS2Q96I59 477 aaKnown RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 PNRC2Q9NPJ4 139 aaKnown RBP11.39□□□□□ -0.59
HIF3A-204ENST00000300862 PRR13Q9NZ81 148 aa11.39□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF726A6NNF4 738 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 SULT2B1O00204 365 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 GPR31O00270 319 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 GP1BAP07359 652 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 MSX1P28360 303 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 EPHA8P29322 1005 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 LUMP51884 338 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 C11orf87Q6NUJ2 197 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF529Q6P280 563 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 TMEM17Q86X19 198 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 DTX1Q86Y01 620 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 FAM219AQ8IW50 185 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 SLC22A8Q8TCC7 542 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 ZC3H10Q96K80 434 aaKnown RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 GNRHR2Q96P88 292 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 GPER1Q99527 375 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 VRK1Q99986 396 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 FANCFQ9NPI8 374 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 COMMD9Q9P000 198 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 C13orf42A0A1B0GVH6 325 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 TOX3O15405 576 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 RAD51DO75771 328 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 CD8AP01732 235 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 CASRP41180 1078 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 TMEM88Q6PEY1 159 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 OR2W3Q7Z3T1 314 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 OR4K15Q8NH41 348 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 C1orf147Q96MC9 270 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 OXGR1Q96P68 337 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 USB1Q9BQ65 265 aaKnown RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 MYOZ1Q9NP98 299 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 SLC2A8Q9NY64 477 aa11.38□□□□□ -0.59
HIF3A-204ENST00000300862 CHCHD2Q9Y6H1 151 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-204ENST00000300862 IGKV1-9A0A0C4DH69 117 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 A0A1B0GW55 424 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 F5H5K5 113 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 EFSO43281 561 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 CRTAPO75718 401 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ATG12O94817 140 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 DUX4L2P0CJ85 424 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 DUX4L3P0CJ86 424 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms