RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 FAM168AQ92567 244 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 SPTSSAQ969W0 71 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 MUCL1Q96DR8 90 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 FBXO17Q96EF6 278 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 SLIRPQ9GZT3 109 aaKnown RBP18.13■□□□□ 0.49
SMCO4-201ENST00000298966 PLEK2Q9NYT0 353 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 KCNS2Q9ULS6 477 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 TMEM269A0A1B0GVZ9 245 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 RER1O15258 196 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 ARL6IP5O75915 188 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 UBL3O95164 117 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 ISG15P05161 165 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 UBCP0CG48 685 aaKnown RBP18.12■□□□□ 0.49
SMCO4-201ENST00000298966 COX5BP10606 129 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 PAX7P23759 505 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 GZMKP49863 264 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 NANOS3P60323 173 aaKnown RBP18.12■□□□□ 0.49
SMCO4-201ENST00000298966 TMEM244Q5VVB8 128 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 OTPQ5XKR4 325 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 SSX8Q7RTT4 187 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 ZNF525Q8N782 197 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 OR1K1Q8NGR3 316 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 ABHD4Q8TB40 342 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 RADILQ96JH8 1075 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 CBLN4Q9NTU7 201 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 FRRS1LQ9P0K9 344 aa18.12■□□□□ 0.49
SMCO4-201ENST00000298966 ZFPL1O95159 310 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 ZNF32P17041 273 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 COX5AP20674 150 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 HNF1AP20823 631 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 USF1P22415 310 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-201ENST00000298966 OTX1P32242 354 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-201ENST00000298966 SOX6P35712 828 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 CCDC92Q53HC0 331 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-201ENST00000298966 WDR38Q5JTN6 314 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 BCL2L15Q5TBC7 163 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 C11orf71Q6IPW1 123 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 TMEM53Q6P2H8 277 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 IL17RELQ6ZVW7 336 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 SKA3Q8IX90 412 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 C17orf78Q8N4C9 275 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 ZNF676Q8N7Q3 588 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 CCDC54Q8NEL0 328 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 TBC1D15Q8TC07 691 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 GPR148Q8TDV2 347 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 SH3GL3Q99963 347 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 OR2H1Q9GZK4 316 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 NXF2Q9GZY0 626 aaKnown RBP18.11■□□□□ 0.49
SMCO4-201ENST00000298966 CHODLQ9H9P2 273 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 MOV10Q9HCE1 1003 aaKnown RBP18.11■□□□□ 0.49
SMCO4-201ENST00000298966 NUFIP1Q9UHK0 495 aaKnown RBP18.11■□□□□ 0.49
SMCO4-201ENST00000298966 FBXL3Q9UKT7 428 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 PMF1-BGLAPU3KQ54 211 aa18.11■□□□□ 0.49
SMCO4-201ENST00000298966 OR6C6A6NF89 314 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 ZNF879B4DU55 563 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 LYZL6O75951 148 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 ITGA5P08648 1049 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 MMP7P09237 267 aaPredicted RBP18.1■□□□□ 0.49
SMCO4-201ENST00000298966 CSF3P09919 207 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 ACHEP22303 614 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 ACSM3Q53FZ2 586 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 FAM166AQ6J272 317 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 SPATC1Q76KD6 591 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 FBXL14Q8N1E6 418 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 OR1F12Q8NHA8 337 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 C10orf105Q8TEF2 133 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 HTRA1Q92743 480 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 BCL2L2Q92843 193 aaPredicted RBP18.1■□□□□ 0.49
SMCO4-201ENST00000298966 DCLRE1CQ96SD1 692 aaKnown RBP18.1■□□□□ 0.49
SMCO4-201ENST00000298966 DHRS9Q9BPW9 319 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 MMP27Q9H306 513 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 OBP2BQ9NPH6 170 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 FAM206AQ9NX38 181 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 POU2F3Q9UKI9 436 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 OR52A1Q9UKL2 312 aa18.1■□□□□ 0.49
SMCO4-201ENST00000298966 SYNGR3O43761 229 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 DOK2O60496 412 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 WNT11O96014 354 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 RPS19P39019 145 aaKnown RBP18.09■□□□□ 0.49
SMCO4-201ENST00000298966 MTNR1BP49286 362 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 TPTEP56180 551 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 RPS11P62280 158 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMCO4-201ENST00000298966 ZNF404Q494X3 552 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 Q499Y3 187 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 TIMM23BQ5SRD1 257 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 FAM120AOSQ5T036 256 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 DRAM2Q6UX65 266 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 UNQ9370/PRO34162Q6UXP9 181 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 TPRA1Q86W33 373 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 ELMOD2Q8IZ81 293 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 PRSS35Q8N3Z0 413 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 IL17RDQ8NFM7 739 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 ZFAND2BQ8WV99 257 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 ITFG2Q969R8 447 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 SLC25A46Q96AG3 418 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 PDCD1LG2Q9BQ51 273 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 RNF121Q9H920 327 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 G6PC2Q9NQR9 355 aa18.09■□□□□ 0.49
SMCO4-201ENST00000298966 TRBV5-5A0A0J9YX44 114 aa18.08■□□□□ 0.48
SMCO4-201ENST00000298966 E7EQL1 145 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms