RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ATXN7O15265 892 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 EFSO43281 561 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 MECP2P51608 486 aaKnown RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 ABCA11PQ4W5N1 156 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 OCSTAMPQ9BR26 566 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 NUDT22Q9BRQ3 303 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 NICN1Q9BSH3 213 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 ALX4Q9H161 411 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 LUZP4Q9P127 313 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 SERINC4A6NH21 518 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 DUS4LO95620 317 aaKnown RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 GABRG2P18507 467 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 CHATP28329 748 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 ACAA2P42765 397 aaKnown RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 COL19A1Q14993 1142 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 ZNF124Q15973 351 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 GFI1BQ5VTD9 330 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 MEX3BQ6ZN04 569 aaKnown RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 REEP6Q96HR9 211 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 PBDC1Q9BVG4 233 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 PTGES2Q9H7Z7 377 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 RANBP2P49792 3224 aaKnown RBP13.28□□□□□ -0.28
SPIDR-201ENST00000297423 TMEM33P57088 247 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 SSTP61278 116 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 PYY3Q5JQD4 70 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 LINC01590Q5TEZ4 76 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 Q6ZS52 159 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 DCXRQ7Z4W1 244 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 CCDC54Q8NEL0 328 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 OR52N4Q8NGI2 321 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 G6PC3Q9BUM1 346 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 CNTD2Q9H8S5 307 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 TBC1D29Q9UFV1 150 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 SLC17A4Q9Y2C5 497 aa13.28□□□□□ -0.28
SPIDR-201ENST00000297423 CACNA1EQ15878 2313 aa13.27□□□□□ -0.28
SPIDR-201ENST00000297423 ZNF729A6NN14 1252 aaPredicted RBP13.27□□□□□ -0.28
SPIDR-201ENST00000297423 UBE2CO00762 179 aa13.27□□□□□ -0.28
SPIDR-201ENST00000297423 ZIC1Q15915 447 aa13.27□□□□□ -0.28
SPIDR-201ENST00000297423 HLA-DQA1Q5Y7H0 255 aa13.27□□□□□ -0.28
SPIDR-201ENST00000297423 OR1J1Q8NGS3 322 aa13.27□□□□□ -0.28
SPIDR-201ENST00000297423 DOK5Q9P104 306 aa13.27□□□□□ -0.28
SPIDR-201ENST00000297423 SMCO3A2RU48 225 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 SCGNO76038 276 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 IGKV1D-16P01601 117 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 CARD17Q5XLA6 110 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 ZFP62Q8NB50 900 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-201ENST00000297423 BSCL2Q96G97 398 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-201ENST00000297423 UTP23Q9BRU9 249 aaKnown RBP13.27□□□□□ -0.29
SPIDR-201ENST00000297423 TPSD1Q9BZJ3 242 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 A0A1W2PP11 408 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 CCINQ13939 588 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 OR51T1Q8NGJ9 327 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 TERB2Q8NHR7 220 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 SLC25A43Q8WUT9 341 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-201ENST00000297423 EDAQ92838 391 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 ABHD6Q9BV23 337 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 RNF126Q9BV68 326 aa13.27□□□□□ -0.29
SPIDR-201ENST00000297423 METTL1Q9UBP6 276 aaKnown RBP13.27□□□□□ -0.29
SPIDR-201ENST00000297423 NBASA2RRP1 2371 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 KIF26AQ9ULI4 1882 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-201ENST00000297423 TCAPO15273 167 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 PPICP45877 212 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 BTG2P78543 158 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 TMEM128Q5BJH2 165 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 FBXO42Q6P3S6 717 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 GLIPR1L1Q6UWM5 242 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 Q6ZSR6 202 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 TMEM217Q8N7C4 229 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 OR56B1Q8NGI3 324 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 OR1E3Q8WZA6 343 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 SLCO5A1Q9H2Y9 848 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 FLVCR1Q9Y5Y0 555 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 A0A087WUJ7 227 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 CDRT15L2A8MXV6 281 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 ST8SIA5O15466 376 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 SLC34A2O95436 690 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 AK1P00568 194 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 TNFP01375 233 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 IGHV2-70P01814 119 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 TAS2R31P59538 309 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 MESTQ5EB52 335 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 GPR119Q8TDV5 335 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 THAP3Q8WTV1 239 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-201ENST00000297423 GDF2Q9UK05 429 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-201ENST00000297423 OR52A1Q9UKL2 312 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 ROS1P08922 2347 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 PMS2P1A4D2B8 440 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 MEGF11A6BM72 1044 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 MFNGO00587 321 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 EML2O95834 649 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 KLK2P20151 261 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 HSD11B1P28845 292 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 PEBP1P30086 187 aaKnown RBP13.26□□□□□ -0.29
SPIDR-201ENST00000297423 TOMM34Q15785 309 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-201ENST00000297423 HIST2H3PS2Q5TEC6 136 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 RLN3Q8WXF3 142 aa13.26□□□□□ -0.29
SPIDR-201ENST00000297423 SHDQ96IW2 340 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms