RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 UBE2NLQ5JXB2 153 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 FAM166AQ6J272 317 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 DRAM2Q6UX65 266 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 ABHD12BQ7Z5M8 362 aaPredicted RBP13.59□□□□□ -0.23
LSM6-201ENST00000296581 NAA40Q86UY6 237 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 C9orf62Q8N4C0 152 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 PLPP7Q8NBV4 271 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 OR1J2Q8NGS2 313 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 FGGYQ96C11 551 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 OR5V1Q9UGF6 321 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 STEAP1Q9UHE8 339 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 ACACAQ13085 2346 aa13.58□□□□□ -0.23
LSM6-201ENST00000296581 A0A1W2PQ09 198 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 E9PLN8 166 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 DBHP09172 617 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 CSF3P09919 207 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 OR3A2P47893 321 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 GUSBP1Q15486 140 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 TAB1Q15750 504 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 TEX261Q6UWH6 196 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 Q6ZSR3 168 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 DOK3Q7L591 496 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 ZNF680Q8NEM1 530 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 AKR7LQ8NHP1 331 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 ADAT3Q96EY9 351 aaPredicted RBP13.58□□□□□ -0.24
LSM6-201ENST00000296581 TRIB1Q96RU8 372 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 PRSS50Q9UI38 385 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 ETV7Q9Y603 341 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 CACNG2Q9Y698 323 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 U3KQ87 197 aa13.58□□□□□ -0.24
LSM6-201ENST00000296581 C5orf63A6NC05 138 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 SLC17A2O00624 439 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 SLC6A9P48067 706 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 CLDN12P56749 244 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 MADCAM1Q13477 382 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 ASAH1Q13510 395 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 PLEKHN1Q494U1 663 aaPredicted RBP13.57□□□□□ -0.24
LSM6-201ENST00000296581 FBXW9Q5XUX1 488 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 ZNF529Q6P280 563 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 FGD2Q7Z6J4 655 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 SERPINA12Q8IW75 414 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 OR51A2Q8NGJ7 313 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 SOX7Q9BT81 388 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 PRELID3BQ9Y3B1 194 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 AHRRA9YTQ3 701 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 RRP8O43159 456 aaKnown RBP13.57□□□□□ -0.24
LSM6-201ENST00000296581 ZNHIT1O43257 154 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 CRYABP02511 175 aaKnown RBP13.57□□□□□ -0.24
LSM6-201ENST00000296581 TBR1Q16650 682 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 SLC36A2Q495M3 483 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 GLT8D1Q68CQ7 371 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 LYPD6Q86Y78 171 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 UBE2J2Q8N2K1 259 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 NKAIN3Q8N8D7 197 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 WNT2BQ93097 391 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 SLC25A38Q96DW6 304 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 ABHD17AQ96GS6 310 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 GPR137Q96N19 417 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 C12orf49Q9H741 205 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 ING3Q9NXR8 418 aa13.57□□□□□ -0.24
LSM6-201ENST00000296581 LOC390937A0A1W2PQ73 354 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 PRSS44E7EML9 344 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 ITGA5P08648 1049 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 HTR5AP47898 357 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 PITPNBP48739 271 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 SFRP5Q5T4F7 317 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 C9orf135Q5VTT2 229 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 COMMD2Q86X83 199 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 Q8N402 240 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 CCDC54Q8NEL0 328 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 OR5M9Q8NGP3 310 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 OR14K1Q8NGZ2 314 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 LYZL4Q96KX0 146 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 ABCG5Q9H222 651 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 RTTNQ86VV8 2226 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 FRYQ5TBA9 3013 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 HLA-DQB1P01920 261 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 MPGP29372 298 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 HGFACQ04756 655 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 ACSF3Q4G176 576 aaPredicted RBP13.56□□□□□ -0.24
LSM6-201ENST00000296581 PABPC1L2AQ5JQF8 200 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 PYHIN1Q6K0P9 492 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 BAIAP2L2Q6UXY1 529 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 CMTM4Q8IZR5 234 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 OR1M1Q8NGA1 313 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 OR5D14Q8NGL3 314 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 FAM71F1Q96KD3 344 aaPredicted RBP13.56□□□□□ -0.24
LSM6-201ENST00000296581 SEC22CQ9BRL7 303 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 OR10A2Q9H208 303 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 GHITMQ9H3K2 345 aa13.56□□□□□ -0.24
LSM6-201ENST00000296581 RPS10-NUDT3A0A1W2PQS6 291 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 ZNF20P17024 532 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 SCN1BQ07699 218 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 SPOCK1Q08629 439 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 RAB11BQ15907 218 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 C1orf100Q5SVJ3 147 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 FAM214BQ7L5A3 538 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 SLC25A28Q96A46 364 aa13.55□□□□□ -0.24
LSM6-201ENST00000296581 DOCK7Q96N67 2140 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms