RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 RMND5BQ96G75 393 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 HBEGFQ99075 208 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TRIM4Q9C037 500 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 FAM107BQ9H098 131 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 NAT10Q9H0A0 1025 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 TRABDQ9H4I3 376 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 DHX35Q9H5Z1 703 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 REEP4Q9H6H4 257 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 EML4Q9HC35 981 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 ABCB9Q9NP78 766 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 IFT46Q9NQC8 304 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SLC2A9Q9NRM0 540 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TEX10Q9NXF1 929 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 TMEM9Q9P0T7 183 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 PRODH2Q9UF12 536 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SMPXQ9UHP9 88 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SLC7A7Q9UM01 511 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 AMDHD2Q9Y303 409 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SNX24Q9Y343 169 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TICRRQ7Z2Z1 1910 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TCHHQ07283 1943 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 A0A0B4J2E0 115 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 A0A0G2JK05 382 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 A0A1B0GTH9 108 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 LOC101059948A0A1B0GTJ6 334 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 A0A1B0GX12 115 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 OR5B21A6NL26 309 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 EFCAB7A8K855 629 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 IDSB3KWA1 339 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 TRDCB7Z8K6 153 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 C21orf140B9A014 251 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 H7C0C1 242 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 CCRL2O00421 344 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 ACOT8O14734 319 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 ZNHIT1O43257 154 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 NDUFA2O43678 99 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 SOX15O60248 233 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 CTNSO60931 367 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 SOX30O94993 753 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 NDUFB8O95169 186 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 LYPD3O95274 346 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 SEMA4FO95754 770 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 RAB36O95755 333 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 HPP00738 406 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 CATP04040 527 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 ZNF883P0CG24 379 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 COX5AP20674 150 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 SAA4P35542 130 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 NUDT1P36639 197 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 MAGEA12P43365 314 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 OMPP47874 163 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 AP2S1P53680 142 aaPredicted RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 GAS1P54826 345 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 OR4D2P58180 307 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 RHOAP61586 193 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 RPL31P62899 125 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 MYL5Q02045 173 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 PRKCDQ05655 676 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 DYNC1I2Q13409 638 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 EIF2B1Q14232 305 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 PTGES3Q15185 160 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 CARD16Q5EG05 197 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 FFAR4Q5NUL3 377 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 DCAF10Q5QP82 559 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 C9orf64Q5T6V5 341 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 FAM45BPQ6NSW5 357 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 FBXL22Q6P050 247 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 RBMS3Q6XE24 437 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 FRRS1Q6ZNA5 592 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 Q6ZT83 130 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 C9orf139Q6ZV77 190 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 S100A7AQ86SG5 101 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 PIP4P1Q86T03 277 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 RIMKLAQ8IXN7 391 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 DND1Q8IYX4 353 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 PGBD5Q8N414 524 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 TCEANCQ8N8B7 351 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 OR2AE1Q8NHA4 323 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 SLC7A13Q8TCU3 470 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 WFDC5Q8TCV5 224 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 SFXN5Q8TD22 340 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 IGFBPL1Q8WX77 278 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 OR5P2Q8WZ92 322 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 GTF3AQ92664 365 aaKnown RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 ANKRD9Q96BM1 317 aaPredicted RBP3.82□□□□□ -1.8
CD44-202ENST00000278385 TLCD1Q96CP7 247 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 OXGR1Q96P68 337 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 ATF6BQ99941 703 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 FAIM2Q9BWQ8 316 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 HCAR1Q9BXC0 346 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 C3orf14Q9HBI5 128 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 FBXO8Q9NRD0 319 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 CMTM6Q9NX76 183 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 FBXL12Q9NXK8 326 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 MSRB1Q9NZV6 116 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 LGALS13Q9UHV8 139 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 TMCO1Q9UM00 188 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 PSG11Q9UQ72 335 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 ARL2BPQ9Y2Y0 163 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms