RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 AGTR1P30556 359 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RPS27P42677 84 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 RRAS2P62070 204 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 PPP2CBP62714 309 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PPP2CAP67775 309 aa2.56□□□□□ -2
HERC4-201ENST00000277817 CSNK2A1P68400 391 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 BTG2P78543 158 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PLP2Q04941 152 aa2.56□□□□□ -2
HERC4-201ENST00000277817 MFSD13AQ14CX5 517 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RSU1Q15404 277 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SHHQ15465 462 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TMEM176BQ3YBM2 270 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 PDSS1Q5T2R2 415 aa2.56□□□□□ -2
HERC4-201ENST00000277817 NIPAL3Q6P499 406 aa2.56□□□□□ -2
HERC4-201ENST00000277817 HAGHLQ6PII5 290 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 COX15Q7KZN9 410 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RNF144BQ7Z419 303 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RDH10Q8IZV5 341 aa2.56□□□□□ -2
HERC4-201ENST00000277817 GTPBP8Q8N3Z3 284 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 CSNK2A3Q8NEV1 391 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR5D14Q8NGL3 314 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR5H6Q8NGV6 325 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR5H2Q8NGV7 314 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR56B4Q8NH76 319 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TOMM40LQ969M1 308 aa2.56□□□□□ -2
HERC4-201ENST00000277817 CPNE2Q96FN4 548 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 TXNDC15Q96J42 360 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TSSK2Q96PF2 358 aa2.56□□□□□ -2
HERC4-201ENST00000277817 GON7Q9BXV9 100 aa2.56□□□□□ -2
HERC4-201ENST00000277817 MAGT1Q9H0U3 335 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ISG20L2Q9H9L3 353 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 ZNF160Q9HCG1 818 aa2.56□□□□□ -2
HERC4-201ENST00000277817 AKIP1Q9NQ31 210 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ANKRD10Q9NXR5 420 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ARID1AO14497 2285 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SEC16AO15027 2179 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PCSK5Q92824 1860 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ANAPC1Q9H1A4 1944 aa2.56□□□□□ -2
HERC4-201ENST00000277817 NCOR2Q9Y618 2525 aa2.56□□□□□ -2
HERC4-201ENST00000277817 IGLV3-16A0A075B6K0 115 aa2.56□□□□□ -2
HERC4-201ENST00000277817 KCNE1BA0A087WTH5 132 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TRBV11-1A0A0K0K1C0 115 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TMEM89A2RUT3 159 aa2.56□□□□□ -2
HERC4-201ENST00000277817 A6NIZ1 184 aa2.56□□□□□ -2
HERC4-201ENST00000277817 H7C417 338 aa2.56□□□□□ -2
HERC4-201ENST00000277817 AGPAT2O15120 278 aa2.56□□□□□ -2
HERC4-201ENST00000277817 KCNAB3O43448 404 aa2.56□□□□□ -2
HERC4-201ENST00000277817 CHP2O43745 196 aa2.56□□□□□ -2
HERC4-201ENST00000277817 NME2P1O60361 137 aa2.56□□□□□ -2
HERC4-201ENST00000277817 KCNK2O95069 426 aa2.56□□□□□ -2
HERC4-201ENST00000277817 UBL3O95164 117 aa2.56□□□□□ -2
HERC4-201ENST00000277817 WDPCPO95876 746 aa2.56□□□□□ -2
HERC4-201ENST00000277817 C1QCP02747 245 aa2.56□□□□□ -2
HERC4-201ENST00000277817 P04436 131 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ST6GAL1P15907 406 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SPNP16150 400 aa2.56□□□□□ -2
HERC4-201ENST00000277817 NAGAP17050 411 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RAB3AP20336 220 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TSFMP43897 325 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 VEGFCP49767 419 aa2.56□□□□□ -2
HERC4-201ENST00000277817 DLX5P56178 289 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR10A3P58181 314 aa2.56□□□□□ -2
HERC4-201ENST00000277817 FXYD4P59646 89 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RAP1BP61224 184 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RAP1AP62834 184 aa2.56□□□□□ -2
HERC4-201ENST00000277817 CD300CQ08708 224 aa2.56□□□□□ -2
HERC4-201ENST00000277817 MELKQ14680 651 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ARHGAP11BQ3KRB8 267 aa2.56□□□□□ -2
HERC4-201ENST00000277817 KRTAP21-3Q3LHN1 58 aa2.56□□□□□ -2
HERC4-201ENST00000277817 Q499Y3 187 aa2.56□□□□□ -2
HERC4-201ENST00000277817 LINC01620Q4KN68 170 aa2.56□□□□□ -2
HERC4-201ENST00000277817 FAM27D1Q5T7N8 215 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TMEM244Q5VVB8 128 aa2.56□□□□□ -2
HERC4-201ENST00000277817 FAM166AQ6J272 317 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ALKAL2Q6UX46 152 aa2.56□□□□□ -2
HERC4-201ENST00000277817 C3P1Q6ZMU1 363 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ZNF813Q6ZN06 617 aa2.56□□□□□ -2
HERC4-201ENST00000277817 DPY19L2P2Q6ZN68 376 aa2.56□□□□□ -2
HERC4-201ENST00000277817 LINC00299Q6ZSB3 139 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TRILQ7L0X0 811 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ADGRG3Q86Y34 549 aa2.56□□□□□ -2
HERC4-201ENST00000277817 BPIFB2Q8N4F0 458 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SPEM1Q8N4L4 309 aa2.56□□□□□ -2
HERC4-201ENST00000277817 DNAAF1Q8NEP3 725 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR13C5Q8NGS8 318 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR52N1Q8NH53 320 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ATOH1Q92858 354 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 FGF14Q92915 247 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ZBTB8AQ96BR9 441 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ORAI1Q96D31 301 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RRNAD1Q96FB5 475 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 LCORQ96JN0 433 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 OR2M2Q96R28 347 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PHB2Q99623 299 aa2.56□□□□□ -2
HERC4-201ENST00000277817 MICU1Q9BPX6 476 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RPP25Q9BUL9 199 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 PLA2G12AQ9BZM1 189 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SLIRPQ9GZT3 109 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 EIF5A2Q9GZV4 153 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 NDUFB11Q9NX14 153 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms