RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CD1EP15812 388 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 CTGFP29279 349 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 RAE1P78406 368 aaKnown RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 FAM58AQ8N1B3 248 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 KISS1RQ969F8 398 aaPredicted RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 PIGMQ9H3S5 423 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 FBXO8Q9NRD0 319 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 QPCTLQ9NXS2 382 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 LRP12Q9Y561 859 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 SLC31A2O15432 143 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 JTBO76095 146 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 POU3F3P20264 500 aaPredicted RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 GPNMBQ14956 572 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 RTL8BQ17RB0 113 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 SFTPA1Q8IWL2 248 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 OSR2Q8N2R0 312 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 NT5CQ8TCD5 201 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 DUS3LQ96G46 650 aaKnown RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 VN1R1Q9GZP7 353 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 FSCN3Q9NQT6 498 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 NDRG3Q9UGV2 375 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 HDGFL3Q9Y3E1 203 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 OR2C1O95371 312 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 CELA2BP08218 269 aaPredicted RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 SPINK2P20155 84 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 PPP1CAP62136 330 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 OR1C1Q15619 314 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 FAM122CQ6P4D5 195 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 LINC01555Q8NAE3 123 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 FOXB1Q99853 325 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 FBXO34Q9NWN3 711 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 FBXO4Q9UKT5 387 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 SERTM2A0A1B0GWG4 89 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 H7BYZ3 331 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 CTRB1P17538 263 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 NTF3P20783 257 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 NUP214P35658 2090 aaPredicted RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 PRSS12P56730 875 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 RAB1AP62820 205 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 OR2F1Q13607 317 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 TPBGQ13641 420 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 SP6Q3SY56 376 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 CTRB2Q6GPI1 263 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 UBALD2Q8IYN6 164 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 TP53I13Q8NBR0 393 aaPredicted RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 WDR89Q96FK6 387 aaPredicted RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 CHST6Q9GZX3 395 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 ZNF727A8MUV8 499 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 PPP5D1E7EU14 171 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 OR2B8PP59922 312 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 RXFP4Q8TDU9 374 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 NKX6-2Q9C056 277 aaPredicted RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 FGF20Q9NP95 211 aaPredicted RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 ZNF629Q9UEG4 869 aaPredicted RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 ANKUB1A6NFN9 424 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 ATP6V1G2-DDX39BF2Z307 99 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 ZNF117Q03924 483 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 SPEM2Q0P670 501 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 C4orf17Q53FE4 359 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 KMT5CQ86Y97 462 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 NOXO1Q8NFA2 376 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 OR10V1Q8NGI7 309 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 OR1L3Q8NH93 324 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 PPP1R1CQ8WVI7 109 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 BARX1Q9HBU1 254 aaPredicted RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 DLL4Q9NR61 685 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 AQP8O94778 261 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 PDGFBP01127 241 aaPredicted RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 ADH4P08319 380 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 LINC00303Q3SY05 128 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 PRR27Q6MZM9 219 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 GFRALQ6UXV0 394 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 A0A1B0GTH9 108 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 AVPR2P30518 371 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 CSN1S1P47710 185 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 DSCR4P56555 118 aaPredicted RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 ZXDAP98168 799 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 FBXL14Q8N1E6 418 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 TTC9Q92623 222 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 PLSCR3Q9NRY6 295 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 LILRA5A6NI73 299 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 RER1O15258 196 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 CST7O76096 145 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 CT45A10P0DMU9 189 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 RRASP10301 218 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 SPNP16150 400 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 ASCL1P50553 236 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 ZNF90Q03938 601 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 RGS7BPQ6MZT1 257 aaPredicted RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 C1orf87Q8N0U7 546 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 FN3KRPQ9HA64 309 aa10.31□□□□□ -0.76
USP53-201ENST00000274030 DDX60LQ5H9U9 1706 aaKnown RBP10.31□□□□□ -0.76
USP53-201ENST00000274030 AKAP11Q9UKA4 1901 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 TEX51A0A1B0GUA7 166 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 RAB19A4D1S5 217 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 SLC25A6P12236 298 aa10.3□□□□□ -0.76
USP53-201ENST00000274030 GLULP15104 373 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms