RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 H3BSH0 61 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 SIAH2O43255 324 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 SGCEO43556 437 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 FARS2O95363 451 aaKnown RBP21.33■■□□□ 1
SSBP4-201ENST00000270061 OR3A2P47893 321 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 RIN1Q13671 783 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 ASPHD2Q6ICH7 369 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 ZNF813Q6ZN06 617 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 SNX29P2Q8IUI4 249 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 GDPD1Q8N9F7 314 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 OR8B12Q8NGG6 310 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 OR10A4Q9H209 315 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 ZNF275Q9NSD4 429 aaPredicted RBP21.33■■□□□ 1
SSBP4-201ENST00000270061 CKLFQ9UBR5 152 aa21.33■■□□□ 1
SSBP4-201ENST00000270061 PRRC2AP48634 2157 aaKnown RBP21.32■■□□□ 1
SSBP4-201ENST00000270061 A0A1B0GTI1 187 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 SYNGR3O43761 229 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 PAHP00439 452 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 CD37P11049 281 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 ELK1P19419 428 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 DNASE1P24855 282 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 ART1P52961 327 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 TESK1Q15569 626 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 SLC16A14Q7RTX9 510 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 LYSMD2Q8IV50 215 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 ZNF100Q8IYN0 542 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 STEAP2Q8NFT2 490 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 CHPT1Q8WUD6 406 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 SPTSSAQ969W0 71 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 PIK3IP1Q96FE7 263 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 PPP1R3EQ9H7J1 279 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 SLC17A5Q9NRA2 495 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 ABCB10Q9NRK6 738 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 UPB1Q9UBR1 384 aa21.32■■□□□ 1
SSBP4-201ENST00000270061 A0A1W2PPR1 153 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 SYT7O43581 403 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 IGHV3-9P01782 118 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 CCL1P22362 96 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 GALK2Q01415 458 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 P2RY6Q15077 328 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 KRTAP27-1Q3LI81 207 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 SFRP5Q5T4F7 317 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 Q6ZT83 130 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 SKA3Q8IX90 412 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 SAMD12Q8N8I0 201 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 VPS13CQ709C8 3753 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 ANXA2P2A6NMY6 339 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 APOA1P02647 267 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 MAS1P04201 325 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 THBDP07204 575 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 ANXA2P07355 339 aaKnown RBP21.31■■□□□ 1
SSBP4-201ENST00000270061 ZNF32P17041 273 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 ARF1P84077 181 aaKnown RBP21.31■■□□□ 1
SSBP4-201ENST00000270061 ABHD12BQ7Z5M8 362 aaPredicted RBP21.31■■□□□ 1
SSBP4-201ENST00000270061 ZNF319Q9P2F9 582 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 PRSS50Q9UI38 385 aa21.31■■□□□ 1
SSBP4-201ENST00000270061 DSCAMO60469 2012 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 A0A1B0GVG6 124 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 A0A1B0GVI7 797 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 MEGF11A6BM72 1044 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 OR6C6A6NF89 314 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 FAM25AB3EWG3 89 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 FAM25CB3EWG5 89 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 FAM25GB3EWG6 89 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 DOK2O60496 412 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 IGLV3-1P01715 115 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 MMP7P09237 267 aaPredicted RBP21.3■■□□□ 1
SSBP4-201ENST00000270061 CALCBP10092 127 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 IL32P24001 234 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 SCAND1P57086 179 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 STEAP3Q658P3 488 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 OR5H6Q8NGV6 325 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 OR1F12Q8NHA8 337 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 OR51E1Q8TCB6 317 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 S100PBPQ96BU1 408 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 OR2H1Q9GZK4 316 aa21.3■■□□□ 1
SSBP4-201ENST00000270061 A0A0U1RQV5 110 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 F5H5K5 113 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 M0R135 149 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 SNRPBP14678 240 aaKnown RBP21.29■■□□□ 1
SSBP4-201ENST00000270061 PSG4Q00888 419 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 TSC22D1Q15714 1073 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 HES5Q5TA89 166 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 FAM57BQ71RH2 274 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 ZNF671Q8TAW3 534 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 ZNF799Q96GE5 643 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 MALT1Q9UDY8 824 aa21.29■■□□□ 1
SSBP4-201ENST00000270061 ARID1AO14497 2285 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 CNOT4O95628 575 aaKnown RBP21.28■■□□□ 1
SSBP4-201ENST00000270061 EIF4EP06730 217 aaKnown RBP21.28■■□□□ 1
SSBP4-201ENST00000270061 SLC2A1P11166 492 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 DRAM2Q6UX65 266 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 SPNS3Q6ZMD2 512 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 Q6ZNX1 250 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 WFDC8Q8IUA0 241 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 SERPINA12Q8IW75 414 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 MINDY2Q8NBR6 621 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 PGAM5Q96HS1 289 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 WNT5BQ9H1J7 359 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 TAS2R4Q9NYW5 299 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms