RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MMP28Q9H239 520 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 RGCCQ9H4X1 137 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 RBFOX1Q9NWB1 397 aaKnown RBP10.05□□□□□ -0.8
SCAF11-201ENST00000266589 ZNF391Q9UJN7 358 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 RTTNQ86VV8 2226 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 MGAQ8IWI9 3026 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 CIB4A0PJX0 185 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 C5orf49A4QMS7 147 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 DHRS7CA6NNS2 312 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 GABARAPH6UMI1 98 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 BPNT1O95861 308 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 ALDOBP05062 364 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 IGHV1-2P23083 117 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 GDNFP39905 211 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 KIR2DL2P43627 348 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-201ENST00000266589 PRSS12P56730 875 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 ZNF92Q03936 586 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 GPR176Q14439 515 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 UBE2V2Q15819 145 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 TBRG1Q3YBR2 411 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 VWA1Q6PCB0 445 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 FAM180AQ6UWF9 173 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 UTS2BQ765I0 119 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 DPPA2Q7Z7J5 298 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 ANGPTL5Q86XS5 388 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 OR52I2Q8NH67 350 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 C15orf40Q8WUR7 153 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 FCAMRQ8WWV6 532 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 NANOS1Q8WY41 292 aaKnown RBP10.05□□□□□ -0.8
SCAF11-201ENST00000266589 ZC3HAV1LQ96H79 300 aaKnown RBP10.05□□□□□ -0.8
SCAF11-201ENST00000266589 GPER1Q99527 375 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 DKK4Q9UBT3 224 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
SCAF11-201ENST00000266589 hCG_38984A0A1B0GV85 526 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 FAM240BA0A1B0GVZ2 78 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 XRCC2O43543 280 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 TPPPO94811 219 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 OR3A4PP47883 348 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 MRPS10P82664 201 aaKnown RBP10.04□□□□□ -0.8
SCAF11-201ENST00000266589 TGFBR3Q03167 851 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 PLP2Q04941 152 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 RIPPLY1Q0D2K3 151 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 PMPCAQ10713 525 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 FOXF2Q12947 444 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 TNK1Q13470 666 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 GSG1Q2KHT4 349 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 Q6ZT83 130 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 GLCCI1Q86VQ1 547 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 ZNF584Q8IVC4 421 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 CDH26Q8IXH8 852 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 OR6K3Q8NGY3 331 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 SSC4DQ8WTU2 575 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCAF11-201ENST00000266589 PTX4Q96A99 478 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 MRPS28Q9Y2Q9 187 aaKnown RBP10.04□□□□□ -0.8
SCAF11-201ENST00000266589 CEP295Q9C0D2 2601 aa10.04□□□□□ -0.8
SCAF11-201ENST00000266589 TRAV18A0A075B6X5 111 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 ORC5O43913 435 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 RAD51DO75771 328 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 ALX3O95076 343 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 TPOP07202 933 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 FAM157BP0CG42 384 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 VSIG8P0DPA2 414 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 PRF1P14222 555 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 RAB6AP20340 208 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-201ENST00000266589 GSK3AP49840 483 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 TMPRSS3P57727 454 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 FAM3AP98173 230 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 UNC119Q13432 240 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 SF3B4Q15427 424 aaKnown RBP eCLIP10.03□□□□□ -0.86e-13■■■□□ 14.9
SCAF11-201ENST00000266589 GLIPR1L1Q6UWM5 242 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 COLCA1Q6ZS62 124 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 MDP1Q86V88 176 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 ZNF101Q8IZC7 436 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 PIGTQ969N2 578 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 FAM46BQ96A09 425 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 POM121L2Q96KW2 1035 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 GPR173Q9NS66 373 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 NLKQ9UBE8 527 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 RAB22AQ9UL26 194 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 MEIOCA2RUB1 952 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 LYZL6O75951 148 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 CNOT4O95628 575 aaKnown RBP10.03□□□□□ -0.8
SCAF11-201ENST00000266589 PER3P56645 1201 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 QRFPP83859 136 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 KLF9Q13886 244 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-201ENST00000266589 KISS1Q15726 138 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 PLET1Q6UQ28 207 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 PAQR4Q8N4S7 273 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-201ENST00000266589 PNLDC1Q8NA58 520 aaKnown RBP10.03□□□□□ -0.8
SCAF11-201ENST00000266589 DUSP18Q8NEJ0 188 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 OR5D18Q8NGL1 313 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 ITFG2Q969R8 447 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 SPSB4Q96A44 273 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 ZNF71Q9NQZ8 489 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-201ENST00000266589 MRPL15Q9P015 296 aaKnown RBP10.03□□□□□ -0.8
SCAF11-201ENST00000266589 KLK11Q9UBX7 282 aa10.03□□□□□ -0.8
SCAF11-201ENST00000266589 ACACAQ13085 2346 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms