RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 A0A1W2PP11 408 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 SIGLEC5O15389 551 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 KCNAB3O43448 404 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 ZFAND5O76080 213 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 DCDP81605 110 aaKnown RBP13.46□□□□□ -0.25
DDX56-201ENST00000258772 ACY1Q03154 408 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 SIGLEC14Q08ET2 396 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 TMEM128Q5BJH2 165 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 FAM122CQ6P4D5 195 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 UNQ6126/PRO20091Q6UXV3 157 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 CPEB2Q7Z5Q1 589 aaKnown RBP13.46□□□□□ -0.25
DDX56-201ENST00000258772 BPIFCQ8NFQ6 507 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 ZC3H10Q96K80 434 aaKnown RBP13.46□□□□□ -0.25
DDX56-201ENST00000258772 OXGR1Q96P68 337 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 NMES1Q9C002 83 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 FAM117AQ9C073 453 aa13.46□□□□□ -0.25
DDX56-201ENST00000258772 TOR1AO14656 332 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 RAMP1O60894 148 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 HCKP08631 526 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 QDPRP09417 244 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 CCL1P22362 96 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 VAX1Q5SQQ9 334 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 OR2M3Q8NG83 312 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 OR5AP2Q8NGF4 316 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 LRRC46Q96FV0 321 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 C5orf66Q9H5L9 145 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 CSAG2Q9Y5P2 127 aa13.46□□□□□ -0.26
DDX56-201ENST00000258772 CEACAM18A8MTB9 384 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 SCRG1O75711 98 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 RAD51DO75771 328 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 WDPCPO95876 746 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 PGAM2P15259 253 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 ZNF43P17038 809 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 CX3CR1P49238 355 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 CYCSP99999 105 aaKnown RBP13.45□□□□□ -0.26
DDX56-201ENST00000258772 KCNMB1Q16558 191 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 HIST3H3Q16695 136 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 PNLIPRP3Q17RR3 467 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 ARRDC1Q8N5I2 433 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 OR4K17Q8NGC6 315 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 CYYR1Q96J86 154 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 OCSTAMPQ9BR26 566 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 RNF126Q9BV68 326 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 PIGMQ9H3S5 423 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 TRBV6-7A0A0A0MS04 114 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 ATP6V1G2-DDX39BF2Z307 99 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 CRTAPO75718 401 aaPredicted RBP13.45□□□□□ -0.26
DDX56-201ENST00000258772 IGFBP4P22692 258 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 NPY4RP50391 375 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 DEFA5Q01523 94 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 MC2RQ01718 297 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 TMEM176BQ3YBM2 270 aaPredicted RBP13.45□□□□□ -0.26
DDX56-201ENST00000258772 ACTBL2Q562R1 376 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 FAM57BQ71RH2 274 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 DOK3Q7L591 496 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 ARMC10Q8N2F6 343 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 OR56B1Q8NGI3 324 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 SSC4DQ8WTU2 575 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 MARC2Q969Z3 335 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 TMEM230Q96A57 120 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 PIK3IP1Q96FE7 263 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 ARHGAP5-AS1Q96IT6 56 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 GPER1Q99527 375 aa13.45□□□□□ -0.26
DDX56-201ENST00000258772 MRPS17Q9Y2R5 130 aaKnown RBP13.45□□□□□ -0.26
DDX56-201ENST00000258772 IGKV1-9A0A0C4DH69 117 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 TEX13DA0A0J9YY54 714 aaPredicted RBP13.44□□□□□ -0.26
DDX56-201ENST00000258772 ZNF726A6NNF4 738 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 F8VVB4 439 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 F8VWA3 439 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 DNASE2O00115 360 aaPredicted RBP13.44□□□□□ -0.26
DDX56-201ENST00000258772 MFNGO00587 321 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 SFTPDP35247 375 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 SHBQ15464 509 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 FAM189A2Q15884 450 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 GFOD2Q3B7J2 385 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 CCDC36Q8IYA8 594 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 OR1S2Q8NGQ3 325 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 DCUN1D4Q92564 292 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 PCDHB10Q9UN67 800 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 KLK2P20151 261 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 ARHGDIBP52566 201 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 BOLLQ8N9W6 283 aaKnown RBP13.44□□□□□ -0.26
DDX56-201ENST00000258772 OR14K1Q8NGZ2 314 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 STOML3Q8TAV4 291 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 SLC22A8Q8TCC7 542 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 SPSB2Q99619 263 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 AIFM2Q9BRQ8 373 aa13.44□□□□□ -0.26
DDX56-201ENST00000258772 URM1Q9BTM9 101 aaKnown RBP13.44□□□□□ -0.26
DDX56-201ENST00000258772 CACNA1EQ15878 2313 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 E9PLN8 166 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 H0YIZ8 118 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 FGF16O43320 207 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 SFT2D2O95562 160 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 GRB2P62993 217 aaKnown RBP13.43□□□□□ -0.26
DDX56-201ENST00000258772 ZNF239Q16600 458 aaKnown RBP13.43□□□□□ -0.26
DDX56-201ENST00000258772 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
DDX56-201ENST00000258772 UQCC3Q6UW78 93 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 CLEC18BQ6UXF7 455 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms