RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 BGLAPP02818 100 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 NQO2P16083 231 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 HSD17B7P56937 341 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 RAB5BP61020 215 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 SGCBQ16585 318 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 MEX3BQ6ZN04 569 aaKnown RBP10.64□□□□□ -0.71
USHBP1-201ENST00000252597 P4HA3Q7Z4N8 544 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 SFT2D1Q8WV19 159 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 NECAB3Q96P71 396 aaPredicted RBP10.64□□□□□ -0.71
USHBP1-201ENST00000252597 LRRC61Q9BV99 259 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 NDRG3Q9UGV2 375 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 TICRRQ7Z2Z1 1910 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 A6NLC8 198 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 C1orf196B1AJZ1 125 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 RABIFP47224 123 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 POLR2HP52434 150 aaKnown RBP10.64□□□□□ -0.71
USHBP1-201ENST00000252597 F2RL1P55085 397 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 FZD2Q14332 565 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 WDFY1Q8IWB7 410 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 SLC43A2Q8N370 569 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 OR5T2Q8NGG2 359 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 OR4A4PQ8NGN8 299 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 TERB2Q8NHR7 220 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 S1PR5Q9H228 398 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 CD207Q9UJ71 328 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 RCL1Q9Y2P8 373 aaKnown RBP10.64□□□□□ -0.71
USHBP1-201ENST00000252597 PTPRZ1P23471 2315 aaPredicted RBP10.64□□□□□ -0.71
USHBP1-201ENST00000252597 FRYQ5TBA9 3013 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF850A8MQ14 1090 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 RNASEK-C17orf49H0YIS7 233 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 EIF4E2O60573 245 aaKnown RBP10.64□□□□□ -0.71
USHBP1-201ENST00000252597 TPPPO94811 219 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 LPAR6P43657 344 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 CBX5P45973 191 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 MEOX2P50222 304 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 SLC26A5P58743 744 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF260Q3ZCT1 412 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 DNM1P34Q6PK57 102 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 PGAM5Q96HS1 289 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 SLC46A1Q96NT5 459 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 GPX7Q96SL4 187 aaPredicted RBP10.64□□□□□ -0.71
USHBP1-201ENST00000252597 SPSB2Q99619 263 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 LAT2Q9GZY6 243 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF700Q9H0M5 742 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 FN3KRPQ9HA64 309 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 ASPMQ8IZT6 3477 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 IGLV1-36A0A0B4J1U3 117 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 IGHV3-15A0A0B4J1V0 119 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 WIPF3A6NGB9 483 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 PRSS44E7EML9 344 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 K7EPK0 472 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 PLPP3O14495 311 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 OR8U9P0C7N5 309 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 TMEM225BP0DP42 221 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 FBLP22087 321 aaKnown RBP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 RRADP55042 308 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 HSF1Q00613 529 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 TLE1Q04724 770 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 HYAL1Q12794 435 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 EMC4Q5J8M3 183 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 C9orf40Q8IXQ3 194 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 FAM71E2Q8N5Q1 922 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 OR8U1Q8NH10 309 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 DYRK2Q92630 601 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 DAZLQ92904 295 aaKnown RBP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 FAM117AQ9C073 453 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 SPACA1Q9HBV2 294 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 C14orf166Q9Y224 244 aaKnown RBP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 FAM230AA0A1W2PPH8 454 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 TTLL8A6PVC2 850 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 PRAMEF26H0Y7S4 382 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF217O75362 1048 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 CD1AP06126 327 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 ANKRD55Q3KP44 614 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 PPP1R3BQ86XI6 285 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 TCTN2Q96GX1 697 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 UTP23Q9BRU9 249 aaKnown RBP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 C1orf198Q9H425 327 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 IFT22Q9H7X7 185 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 METTL7AQ9H8H3 244 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 BARX1Q9HBU1 254 aaPredicted RBP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 PCOLCE2Q9UKZ9 415 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 EML5Q05BV3 1969 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 ARPC4-TTLL3A0A0A6YYG9 625 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 PRR19A6NJB7 356 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 OR5K4A6NMS3 321 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 DUS4LO95620 317 aaKnown RBP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 TTRP02766 147 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 SLC6A8P48029 635 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 CAMLGP49069 296 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF121P58317 390 aaPredicted RBP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 ACY1Q03154 408 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 PJVKQ0ZLH3 352 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 RAB30Q15771 203 aa10.63□□□□□ -0.71
USHBP1-201ENST00000252597 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.63□□□□□ -0.71
USHBP1-201ENST00000252597 NCMAPQ5T1S8 102 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms