RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PPP1R1AQ13522 171 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 UBE3DQ7Z6J8 389 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 ARHGAP5-AS1Q96IT6 56 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 UCK1Q9HA47 277 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 RYDENQ9NUL5 291 aaKnown RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 TNFSF11O14788 317 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 ZNF749O43361 778 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 ACKR3P25106 362 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TCF21O43680 179 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TRAPPC2P0DI81 140 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TRAPPC2BP0DI82 140 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 MMP9P14780 707 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 RRADP55042 308 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 OR4D11Q8NGI4 311 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 NDRG3Q9UGV2 375 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 MED12LQ86YW9 2145 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 LOC102725191A0A1B0GVB3 256 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TTRP02766 147 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SKP2Q13309 424 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 RUNX2Q13950 521 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 THSD4Q6ZMP0 1018 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 MRGPREQ86SM8 312 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 CALHM3Q86XJ0 350 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SLC35G3Q8N808 338 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 OR4D10Q8NGI6 311 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 OR2G2Q8NGZ5 317 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 OR2AE1Q8NHA4 323 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SLC39A7Q92504 469 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 DPF1Q92782 380 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 FOXQ1Q9C009 403 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 ADAM29Q9UKF5 820 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 A0A087X0M5 115 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 A0A1B0GX30 115 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 C4orf47A7E2U8 309 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SLC25A22Q9H936 323 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 PRDM7Q9NQW5 492 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 MED17Q9NVC6 651 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 WIF1Q9Y5W5 379 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TARM1B6A8C7 271 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 RAB13P51153 203 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TIAL1Q01085 375 aaKnown RBP eCLIP6.79□□□□□ -1.321e-6■■□□□ 13.3
RIF1-201ENST00000243326 MOGAT2Q3SYC2 334 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 C19orf35Q6ZS72 473 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 KIRREL1Q96J84 757 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 CD22P20273 847 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 OR3A4PP47883 348 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SLC6A12P48065 614 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 C6orf201Q7Z4U5 140 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SARGQ9BW04 601 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TRAPPC4Q9Y296 219 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 DOCK5Q9H7D0 1870 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 PHIPQ8WWQ0 1821 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 MBLAC1A4D2B0 266 aaPredicted RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.79□□□□□ -1.32
RIF1-201ENST00000243326 NCR3LG1Q68D85 454 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 ZNF880Q6PDB4 577 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 OR10J5Q8NHC4 309 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SNX22Q96L94 193 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 OR51I2Q9H344 312 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 MBD1Q9UIS9 605 aaPredicted RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 FAM78BQ5VT40 261 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 RNF113BQ8IZP6 322 aaKnown RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 ZNF331Q9NQX6 463 aaPredicted RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 FAM24AA6NFZ4 105 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 DIO1P49895 249 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 RPL11P62913 178 aaKnown RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 HSF1Q00613 529 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 DOC2BQ14184 412 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TGIF1Q15583 401 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SLC39A11Q8N1S5 342 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 ZNF561Q8N587 486 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 IL23AQ9NPF7 189 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 TRIP12Q14669 1992 aaPredicted RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 MGMTP16455 207 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SELENOVP59797 346 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 KIR2DS3Q14952 304 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 GLDNQ6ZMI3 551 aaPredicted RBP6.79□□□□□ -1.32
RIF1-201ENST00000243326 CMC2Q9NRP2 79 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 ZNF835Q9Y2P0 537 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 CRYAAP02489 173 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 GYPAP02724 150 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 BAP18Q8IXM2 172 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 SCRG1O75711 98 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 PTBP1P26599 531 aaKnown RBP eCLIP6.78□□□□□ -1.327e-7■■□□□ 13.8
RIF1-201ENST00000243326 C15orf54Q8N8G6 183 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ISYNA1Q9NPH2 558 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 MOKQ9UQ07 419 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 TRAV39A0A0B4J263 110 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ST6GAL1P15907 406 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 TRA2BP62995 288 aaKnown RBP6.78□□□□□ -1.32
RIF1-201ENST00000243326 HES1Q14469 280 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 H2BFWTQ7Z2G1 175 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 OR51F2Q8NH61 342 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ACY3Q96HD9 319 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 TSPAN12O95859 305 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 CTSAP10619 480 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 DCBLD2Q96PD2 775 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 ARHGAP9Q9BRR9 750 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 VAMP8Q9BV40 100 aa6.78□□□□□ -1.32
RIF1-201ENST00000243326 PBOV1Q9GZY1 135 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms