RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 AADACL3Q5VUY0 350 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 HLA-DQA1Q5Y7H0 255 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 KLHL24Q6TFL4 600 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 LHFPL1Q86WI0 220 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 LURAP1LQ8IV03 231 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 C15orf54Q8N8G6 183 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 OR10S1Q8NGN2 331 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 OR13G1Q8NGZ3 307 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 ASH2LQ9UBL3 628 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 SRPK3Q9UPE1 567 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 MRPS28Q9Y2Q9 187 aaKnown RBP13.75□□□□□ -0.21
DDX55-201ENST00000238146 A0A1W2PP11 408 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 SGCEO43556 437 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 ZNF44P15621 663 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 RPS2P15880 293 aaKnown RBP13.74□□□□□ -0.21
DDX55-201ENST00000238146 CBR1P16152 277 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 GLRA1P23415 457 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 AKR1C3P42330 323 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 HGFACQ04756 655 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 OR5H2Q8NGV7 314 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 OR51E1Q8TCB6 317 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 C11orf40Q8WZ69 217 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 HIST1H2BAQ96A08 127 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 KIRREL1Q96J84 757 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 ARL5BQ96KC2 179 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 NECAB3Q96P71 396 aaPredicted RBP13.74□□□□□ -0.21
DDX55-201ENST00000238146 SOHLH2Q9NX45 425 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 CACFD1Q9UGQ2 172 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 MMACHCQ9Y4U1 282 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 PMS2P1A4D2B8 440 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 TAAR5O14804 337 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 CDC14BO60729 498 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 HOXB5P09067 269 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 SMIM6P0DI80 62 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 PET100P0DJ07 73 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 HKR1P10072 659 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 CTHP32929 405 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 CAPZBP47756 277 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 OR3A4PP47883 348 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 P2RY4P51582 365 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 Q7L0L9 218 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 OR5AS1Q8N127 324 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 AKR1E2Q96JD6 320 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 SCGB3A2Q96PL1 93 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 OCSTAMPQ9BR26 566 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 SOX7Q9BT81 388 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 TIMM10BQ9Y5J6 103 aa13.74□□□□□ -0.21
DDX55-201ENST00000238146 IGHV5-51A0A0C4DH38 117 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 C1orf196B1AJZ1 125 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 TO15178 435 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 HTR3BO95264 441 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 SEMA4FO95754 770 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 IGHV4-34P06331 123 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 DAP3P51398 398 aaKnown RBP13.73□□□□□ -0.21
DDX55-201ENST00000238146 DVL1P1P54792 670 aaPredicted RBP13.73□□□□□ -0.21
DDX55-201ENST00000238146 POU3F1Q03052 451 aaPredicted RBP13.73□□□□□ -0.21
DDX55-201ENST00000238146 ZP4Q12836 540 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 TMEM268Q5VZI3 342 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 OR2A2Q6IF42 318 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 TTLL10Q6ZVT0 673 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 FOXRED2Q8IWF2 684 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 KCNG3Q8TAE7 436 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 ARHGAP5-AS1Q96IT6 56 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 OR5B2Q96R09 309 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 WWTR1Q9GZV5 400 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 PARP11Q9NR21 331 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 OSGIN2Q9Y236 505 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 SDCBPO00560 298 aaPredicted RBP13.73□□□□□ -0.21
DDX55-201ENST00000238146 S100A8P05109 93 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 THEGLP0DJG4 465 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 ZNF20P17024 532 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 CPT2P23786 658 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 PPT1P50897 306 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 GFERP55789 205 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 SMCO1Q147U7 214 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 EIF2S3LQ2VIR3 472 aaKnown RBP13.73□□□□□ -0.21
DDX55-201ENST00000238146 OR6S1Q8NH40 331 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 NAA11Q9BSU3 229 aaPredicted RBP13.73□□□□□ -0.21
DDX55-201ENST00000238146 TMEM59Q9BXS4 323 aa13.73□□□□□ -0.21
DDX55-201ENST00000238146 UBE2CO00762 179 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 FABP1P07148 127 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 ZNF806P0C7X5 589 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 AMY2BP19961 511 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 Q6ZRG5 221 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 OR10H5Q8NGA6 315 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 ATXN7L1Q9ULK2 861 aaPredicted RBP13.72□□□□□ -0.21
DDX55-201ENST00000238146 ADAM10O14672 748 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 CST4P01036 141 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 SFTPBP07988 381 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 ZNF708P17019 499 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 ADH6P28332 368 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 PPM1FP49593 454 aaPredicted RBP13.72□□□□□ -0.21
DDX55-201ENST00000238146 HSF1Q00613 529 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 C5orf46Q6UWT4 87 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 H1FNTQ75WM6 255 aaPredicted RBP13.72□□□□□ -0.21
DDX55-201ENST00000238146 SECTM1Q8WVN6 248 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 EMC6Q9BV81 110 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms