RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 HPXP02790 462 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ATP6V1B1P15313 513 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 GABRB1P18505 474 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 GIFP27352 417 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 CRYBB2P43320 205 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 MAGEB1P43366 347 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ACTA2P62736 377 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ACTG2P63267 376 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF92Q03936 586 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 MED21Q13503 144 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 RIPK1Q13546 671 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF691Q5VV52 312 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 PEG10Q86TG7 708 aaKnown RBP9.59□□□□□ -0.87
SF3B6-201ENST00000233468 C8orf59Q8N0T1 100 aaPredicted RBP9.59□□□□□ -0.87
SF3B6-201ENST00000233468 OR5AS1Q8N127 324 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ACBD7Q8N6N7 88 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 YIPF7Q8N8F6 280 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 HAVCR2Q8TDQ0 301 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 UBE2FQ969M7 185 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 SLC30A2Q9BRI3 323 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ABCB9Q9NP78 766 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 COPS3Q9UNS2 423 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 EXOGQ9Y2C4 368 aaKnown RBP9.59□□□□□ -0.87
SF3B6-201ENST00000233468 SNX5Q9Y5X3 404 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 R4GMQ9 66 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 YLPM1P49750 1951 aaKnown RBP9.59□□□□□ -0.87
SF3B6-201ENST00000233468 IGHV4-30-2A0A087WSY4 118 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 A0A0U1RQV5 110 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 FAM181BA6NEQ2 426 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 LOC110117498-PIK3R3F6TDL0 507 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 DLGAP1O14490 977 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 MTRF1O75570 445 aaKnown RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 LY6HO94772 140 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 RPSAP08865 295 aaKnown RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 DBTP11182 482 aaKnown RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 USF1P22415 310 aaPredicted RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 GNALP38405 381 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 NR4A2P43354 598 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 GPR6P46095 362 aaPredicted RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 HSPA13P48723 471 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 ADARB1P78563 741 aaKnown RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF91Q05481 1191 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 MRPL28Q13084 256 aaKnown RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 GFOD2Q3B7J2 385 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 BCL2L15Q5TBC7 163 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 PRSS45Q7RTY3 260 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 COMMD2Q86X83 199 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 CELF2-AS1Q8N7Q2 184 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 BHLHE23Q8NDY6 225 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 CCDC54Q8NEL0 328 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 OR2AE1Q8NHA4 323 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 RAB1CQ92928 201 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 ERGIC1Q969X5 290 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 SGK3Q96BR1 496 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 TBX5Q99593 518 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 PBOV1Q9GZY1 135 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 NKX1-2Q9UD57 310 aaPredicted RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 NUFIP1Q9UHK0 495 aaKnown RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 GTF2A1LQ9UNN4 478 aa9.58□□□□□ -0.88
SF3B6-201ENST00000233468 HEATR1Q9H583 2144 aaKnown RBP9.58□□□□□ -0.88
SF3B6-201ENST00000233468 LRRC30A6NM36 301 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 CLDN25C9JDP6 229 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 PSMD9O00233 223 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 PPIHO43447 177 aaKnown RBP9.57□□□□□ -0.88
SF3B6-201ENST00000233468 IRF2P14316 349 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 MAP2K3P46734 347 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 GSK3AP49840 483 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 CHN2P52757 468 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 CSNK2BP67870 215 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 FAM3AP98173 230 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 LOXL1Q08397 574 aaPredicted RBP9.57□□□□□ -0.88
SF3B6-201ENST00000233468 OR8G1Q15617 311 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 OR8B12Q8NGG6 310 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 OR56B2PQ8NGI1 322 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 CCL17Q92583 94 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 LGALS12Q96DT0 336 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 HIST1H2AAQ96QV6 131 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 OR2V2Q96R30 315 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 MRPS18AQ9NVS2 196 aaKnown RBP9.57□□□□□ -0.88
SF3B6-201ENST00000233468 C14orf119Q9NWQ9 140 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 FAM206AQ9NX38 181 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 CHCHD3Q9NX63 227 aaKnown RBP9.57□□□□□ -0.88
SF3B6-201ENST00000233468 MRM2Q9UI43 246 aaKnown RBP9.57□□□□□ -0.88
SF3B6-201ENST00000233468 GNG8Q9UK08 70 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 OR52A1Q9UKL2 312 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 PPP1R3CQ9UQK1 317 aa9.57□□□□□ -0.88
SF3B6-201ENST00000233468 hCG_38984A0A1B0GV85 526 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 A0A1B0GWJ7 208 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 ANXA2P2A6NMY6 339 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 VWC2LB2RUY7 222 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 J3QRE1 110 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 CDC14BO60729 498 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 CRLF1O75462 422 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 NCR1O76036 304 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 RPP14O95059 124 aaKnown RBP9.56□□□□□ -0.88
SF3B6-201ENST00000233468 APOL3O95236 402 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF12P17014 697 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 MYL12AP19105 171 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 CA6P23280 308 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 COL8A2P25067 703 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms