RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 LINC00303Q3SY05 128 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 PGAP1Q75T13 922 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 ZNF627Q7L945 461 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 LRRTM1Q86UE6 522 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 CCDC190Q86UF4 302 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 NAA40Q86UY6 237 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 NR2C2APQ86WQ0 139 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 NKAIN3Q8N8D7 197 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 Q8NA96 180 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 OR1M1Q8NGA1 313 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 OR1J2Q8NGS2 313 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 OR13C9Q8NGT0 318 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 FGFBP3Q8TAT2 258 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 LGALS14Q8TCE9 139 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 SNRNP27Q8WVK2 155 aaKnown RBP8.47□□□□□ -1.05
TTC1-201ENST00000231238 AKAP1Q92667 903 aaKnown RBP eCLIP8.47□□□□□ -1.05
TTC1-201ENST00000231238 BCL2L2Q92843 193 aaPredicted RBP8.47□□□□□ -1.05
TTC1-201ENST00000231238 FOXRED1Q96CU9 486 aaPredicted RBP8.47□□□□□ -1.05
TTC1-201ENST00000231238 SNRNP40Q96DI7 357 aaKnown RBP8.47□□□□□ -1.05
TTC1-201ENST00000231238 REEP6Q96HR9 211 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 GPER1Q99527 375 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 ZCCHC4Q9H5U6 513 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 ASF1BQ9NVP2 202 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 STEAP1Q9UHE8 339 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 ZNF391Q9UJN7 358 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 SVILO95425 2214 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 NCOR2Q9Y618 2525 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 PTPRQQ9UMZ3 2332 aa8.47□□□□□ -1.05
TTC1-201ENST00000231238 A0A0B4J203 849 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 A0A0G2JK05 382 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 A0A1B0GTI1 187 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 TMEM8BA6NDV4 472 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 XRCC2O43543 280 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 LMX1BO60663 402 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 DHRS3O75911 302 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 IL18BPO95998 194 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 CALCBP10092 127 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 COX5BP10606 129 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 CRYGSP22914 178 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 IGHV1-2P23083 117 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 OTX1P32242 354 aaPredicted RBP8.46□□□□□ -1.05
TTC1-201ENST00000231238 CLDN12P56749 244 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 DEFA1P59665 94 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 DEFA3P59666 94 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 P2RY14Q15391 338 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 TBC1D28Q2M2D7 210 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 ZNF181Q2M3W8 571 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 RGS21Q2M5E4 152 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 UBE2NLQ5JXB2 153 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 TRIQKQ629K1 86 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 XKRXQ6PP77 449 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 MRPL21Q7Z2W9 205 aaKnown RBP8.46□□□□□ -1.05
TTC1-201ENST00000231238 MDP1Q86V88 176 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 ZNF610Q8N9Z0 462 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 SEMA6DQ8NFY4 1073 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 OR2AE1Q8NHA4 323 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 SORCS2Q96PQ0 1159 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 OPN3Q9H1Y3 402 aaPredicted RBP8.46□□□□□ -1.05
TTC1-201ENST00000231238 MIXL1Q9H2W2 232 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 RGCCQ9H4X1 137 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 CDH20Q9HBT6 801 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 TMEM138Q9NPI0 162 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 PLSCR4Q9NRQ2 329 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 EIF3KQ9UBQ5 218 aaKnown RBP8.46□□□□□ -1.05
TTC1-201ENST00000231238 SPATA2Q9UM82 520 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 PIGLQ9Y2B2 252 aa8.46□□□□□ -1.05
TTC1-201ENST00000231238 MRPS7Q9Y2R9 242 aaKnown RBP8.46□□□□□ -1.05
TTC1-201ENST00000231238 CELSR3Q9NYQ7 3312 aa8.46□□□□□ -1.06
TTC1-201ENST00000231238 A0A1W2PR80 420 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 EEF1E1-BLOC1S5C9J1V9 151 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 EEF1E1O43324 174 aaKnown RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 SULT1B1O43704 296 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 UPK1BO75841 260 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 APOA1P02647 267 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 CCL2P13500 99 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 ADRA2CP18825 462 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 ELK1P19419 428 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 HTR2CP28335 458 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 THBS4P35443 961 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 TIMP3P35625 211 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 ETV6P41212 452 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 ART1P52961 327 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 RIPPLY1Q0D2K3 151 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 PMPCAQ10713 525 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 P2RY6Q15077 328 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 SNAI3Q3KNW1 292 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 PRR30Q53SZ7 412 aaPredicted RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 GLYATL3Q5SZD4 288 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 LCE3BQ5TA77 95 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 ZNF324BQ6AW86 544 aaPredicted RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 METAP1DQ6UB28 335 aaPredicted RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 PNLDC1Q8NA58 520 aaKnown RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 CPEB3Q8NE35 698 aaKnown RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 SLC30A7Q8NEW0 376 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 OR6M1Q8NGM8 313 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 PP6455Q8WZ26 134 aa8.45□□□□□ -1.06
TTC1-201ENST00000231238 APOBEC3DQ96AK3 386 aaPredicted RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 ADAT3Q96EY9 351 aaPredicted RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 S100A16Q96FQ6 103 aaKnown RBP8.45□□□□□ -1.06
TTC1-201ENST00000231238 S100A13Q99584 98 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms