RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 PURGQ9UJV8 347 aaKnown RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 LRP12Q9Y561 859 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 PCYT1BQ9Y5K3 369 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 ALPK2Q86TB3 2170 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 IGHV1OR15-9A0A0B4J2B8 117 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 A0A1B0GUH1 482 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 ZNF891A8MT65 544 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 ALG1L2C9J202 215 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 MKRN2OSH3BPM6 223 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 JTBO76095 146 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 ADRA2CP18825 462 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 THBS3P49746 956 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SNTB1Q13884 538 aaKnown RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 IL11RAQ14626 422 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SSX1Q16384 188 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SSX2Q16385 188 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 WIPI1Q5MNZ9 446 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 EXD3Q8N9H8 876 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 MAFAQ8NHW3 353 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 TMED6Q8WW62 240 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 FOXB1Q99853 325 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 TCEAL7Q9BRU2 100 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 PIGMQ9H3S5 423 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SIRT3Q9NTG7 399 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 TET1Q8NFU7 2136 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 RAB27BO00194 218 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SIRPB1O00241 398 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 ZFPL1O95159 310 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 GLRA1P23415 457 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 S100A7P31151 101 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 ZNF718Q3SXZ3 478 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 ARTNQ5T4W7 220 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 LAIR2Q6ISS4 152 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 ZDHHC23Q8IYP9 409 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 ARHGEF39Q8N4T4 335 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 OR10G3Q8NGC4 313 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 OR4C16Q8NGL9 310 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 LIN37Q96GY3 246 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 TAAR9Q96RI9 348 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 P4HTMQ9NXG6 502 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 RPH3ALQ9UNE2 315 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SLC22A20A6NK97 555 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 PPP1CAP62136 330 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 ZNF85Q03923 595 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 DEFB109BQ30KR1 87 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 NOXO1Q8NFA2 376 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 SUCNR1Q9BXA5 334 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 OR6C68A6NDL8 312 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 ZNF705GA8MUZ8 300 aaPredicted RBP10.34□□□□□ -0.75
NOD1-201ENST00000222823 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 ATF1P18846 271 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 KIR2DL3P43628 341 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 BAMBIQ13145 260 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 TRA2AQ13595 282 aaKnown RBP eCLIP10.34□□□□□ -0.75
NOD1-201ENST00000222823 HES1Q14469 280 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 CBLN3Q6UW01 205 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 DND1Q8IYX4 353 aaKnown RBP10.34□□□□□ -0.75
NOD1-201ENST00000222823 RNF32Q9H0A6 362 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 TUBG2Q9NRH3 451 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 CACNA1EQ15878 2313 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 TEX51A0A1B0GUA7 166 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 MDFIC2A0A1B0GVS7 189 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 ZFP92A6NM28 416 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 APOA2P02652 100 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 CELA2BP08218 269 aaPredicted RBP10.34□□□□□ -0.75
NOD1-201ENST00000222823 MMP15P51511 669 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 MVDP53602 400 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 NXPH1P58417 271 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 IRF3Q14653 427 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 TMEM268Q5VZI3 342 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 TIGD3Q6B0B8 471 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 H3F3CQ6NXT2 135 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 RTN4IP1Q8WWV3 396 aaPredicted RBP10.34□□□□□ -0.75
NOD1-201ENST00000222823 BOD1Q96IK1 185 aa10.34□□□□□ -0.75
NOD1-201ENST00000222823 ZNF816-ZNF321PA0A0X1KG74 233 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 A0A1W2PPH5 198 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 F6UZH7 168 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 MBTPS2O43462 519 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 PLPP2O43688 288 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 HYAL3O43820 417 aaPredicted RBP10.33□□□□□ -0.76
NOD1-201ENST00000222823 ANGPTL7O43827 346 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 MOSPD3O75425 235 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CRYBB2P43320 205 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 FMODQ06828 376 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 ZIC1Q15915 447 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 LFNGQ8NES3 379 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 WDFY2Q96P53 400 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 NRTNQ99748 197 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 MFRPQ9BY79 579 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
NOD1-201ENST00000222823 BTBD17A6NE02 478 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 TAAR5O14804 337 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 FFAR1O14842 300 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT62P0C5K7 136 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 PSMB3P49720 205 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms