RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TPT1P13693 172 aaKnown RBP12.09□□□□□ -0.47
RAB3D-201ENST00000222120 BTCP35070 178 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 IGLV3-21P80748 117 aaPredicted RBP12.09□□□□□ -0.47
RAB3D-201ENST00000222120 HSPB2Q16082 182 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 IAH1Q2TAA2 248 aaPredicted RBP12.09□□□□□ -0.47
RAB3D-201ENST00000222120 LINC00114Q6XXX2 140 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 CD300LFQ8TDQ1 290 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 TIMP4Q99727 224 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 NPAS1Q99742 590 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 A0A096LPE4 126 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 LIPT2A6NK58 231 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 NME2P22392 152 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 ENPP1P22413 925 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 MST1P26927 711 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
RAB3D-201ENST00000222120 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
RAB3D-201ENST00000222120 RSPO4Q2I0M5 234 aaPredicted RBP12.09□□□□□ -0.47
RAB3D-201ENST00000222120 TMPPEQ6ZT21 453 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 SLC38A9Q8NBW4 561 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 DOCK7Q96N67 2140 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 TRAF4Q9BUZ4 470 aaPredicted RBP12.09□□□□□ -0.47
RAB3D-201ENST00000222120 TMEM231Q9H6L2 316 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 LRRK1Q38SD2 2015 aa12.09□□□□□ -0.47
RAB3D-201ENST00000222120 FAM166BA8MTA8 275 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 H3BMH7 237 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 CDK2AP1O14519 115 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 EIF1BO60739 113 aaKnown RBP12.08□□□□□ -0.47
RAB3D-201ENST00000222120 MRPL33O75394 65 aaKnown RBP12.08□□□□□ -0.47
RAB3D-201ENST00000222120 CPT2P23786 658 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 ATP1B3P54709 279 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 NICN1Q9BSH3 213 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 EIF5A2Q9GZV4 153 aaKnown RBP12.08□□□□□ -0.47
RAB3D-201ENST00000222120 C12orf10Q9HB07 376 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 OPN4Q9UHM6 478 aa12.08□□□□□ -0.47
RAB3D-201ENST00000222120 NXT1Q9UKK6 140 aaKnown RBP12.08□□□□□ -0.47
RAB3D-201ENST00000222120 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 A0A1W2PQD3 144 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 ZNHIT1O43257 154 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 SPRY1O43609 319 aaPredicted RBP12.08□□□□□ -0.48
RAB3D-201ENST00000222120 DXOO77932 396 aaKnown RBP12.08□□□□□ -0.48
RAB3D-201ENST00000222120 MGMTP16455 207 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 DMWDQ09019 674 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 OGFOD3Q6PK18 319 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 PLPP5Q8NEB5 264 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 UCN2Q96RP3 112 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 SLX1AQ9BQ83 275 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 MS4A7Q9GZW8 240 aaPredicted RBP12.08□□□□□ -0.48
RAB3D-201ENST00000222120 METTL9Q9H1A3 318 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 ROS1P08922 2347 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 TANC1Q9C0D5 1861 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 LOC101059948A0A1B0GTJ6 334 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 SOCS1O15524 211 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 DHHO43323 396 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 IGF2P01344 180 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 GRB2P62993 217 aaKnown RBP12.08□□□□□ -0.48
RAB3D-201ENST00000222120 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
RAB3D-201ENST00000222120 IL1F10Q8WWZ1 152 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 FBXW5Q969U6 566 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 PIGQQ9BRB3 760 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 CXCL2P19875 107 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 ADH6P28332 368 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
RAB3D-201ENST00000222120 DCAF12Q5T6F0 453 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 SEZ6L2Q6UXD5 910 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 VASH2Q86V25 355 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 OR8B12Q8NGG6 310 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 LINC00052Q96N35 136 aa12.08□□□□□ -0.48
RAB3D-201ENST00000222120 IGLV1-36A0A0B4J1U3 117 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 OMGP23515 440 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 ATPAF1Q5TC12 328 aaPredicted RBP12.07□□□□□ -0.48
RAB3D-201ENST00000222120 EXD3Q8N9H8 876 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 ARL11Q969Q4 196 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 B4GALT7Q9UBV7 327 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 CACNA1HO95180 2353 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 IGKV1D-43A0A0B4J1Z2 117 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 PNLIPP16233 465 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 GALNSP34059 522 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 RIPPLY1Q0D2K3 151 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 PPA1Q15181 289 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 COL13A1Q5TAT6 717 aaPredicted RBP12.07□□□□□ -0.48
RAB3D-201ENST00000222120 TMEM88Q6PEY1 159 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 ZNF75AQ96N20 296 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 A0A1W2PPC1 479 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 NXPH3O95157 252 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 TXNDC12O95881 172 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 TAS2R46P59540 309 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 WIPI1Q5MNZ9 446 aaPredicted RBP12.07□□□□□ -0.48
RAB3D-201ENST00000222120 LYG2Q86SG7 212 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 ZNF2Q9BSG1 426 aaPredicted RBP12.07□□□□□ -0.48
RAB3D-201ENST00000222120 TMPRSS13Q9BYE2 586 aa12.07□□□□□ -0.48
RAB3D-201ENST00000222120 ADAP1O75689 374 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 MPC2O95563 127 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 EPHA1P21709 976 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 PSMB6P28072 239 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms