RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.53□□□□□ -0.4
UPK3A-201ENST00000216211 FOXL1Q12952 345 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 C6orf141Q5SZD1 244 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 PRAMEF6Q5VXH4 476 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 PGBD2Q6P3X8 592 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 LYPD2Q6UXB3 125 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 BTNL3Q6UXE8 466 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 LRRN1Q6UXK5 716 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 C1orf87Q8N0U7 546 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 C19orf18Q8NEA5 215 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 OR8B3Q8NGG8 313 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 GNPDA2Q8TDQ7 276 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 RAB40AQ8WXH6 277 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 OR8B2Q96RD0 313 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 EGLN3Q9H6Z9 239 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 MRPL22Q9NWU5 206 aaKnown RBP12.53□□□□□ -0.4
UPK3A-201ENST00000216211 CYB5R1Q9UHQ9 305 aa12.53□□□□□ -0.4
UPK3A-201ENST00000216211 A0A087WXM4 84 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 TFAP2AP05549 437 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 OSMP13725 252 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 CPT2P23786 658 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 EPHA2P29317 976 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 IFNGR2P38484 337 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 RPS27P42677 84 aaKnown RBP12.52□□□□□ -0.41
UPK3A-201ENST00000216211 GATA4P43694 442 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 RPL5P46777 297 aaKnown RBP12.52□□□□□ -0.41
UPK3A-201ENST00000216211 CXCR4P61073 352 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 HOXA4Q00056 320 aaPredicted RBP12.52□□□□□ -0.41
UPK3A-201ENST00000216211 TSPAN31Q12999 210 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 ECH1Q13011 328 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 MALLQ13021 153 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 CLEC12AQ5QGZ9 265 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 LAIR2Q6ISS4 152 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF620Q6ZNG0 422 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 UPRTQ96BW1 309 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 MAP6Q96JE9 813 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF747Q9BV97 191 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 ZMAT3Q9HA38 289 aaKnown RBP12.52□□□□□ -0.41
UPK3A-201ENST00000216211 UFSP2Q9NUQ7 469 aa12.52□□□□□ -0.41
UPK3A-201ENST00000216211 TRAV40A0A0B4J280 105 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 TVP23AA6NH52 213 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 IDH3BO43837 385 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 FAM20BO75063 409 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 PPIAL4GP0DN37 164 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 IRF2P14316 349 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF823P16415 610 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 ANOS1P23352 680 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 PYCR1P32322 319 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 CD200P41217 278 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 PITPNBP48739 271 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 CRISP1P54107 249 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 TPTEP56180 551 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 GABARAPL2P60520 117 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 IL5RAQ01344 420 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 MPPED2Q15777 294 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 LYPD4Q6UWN0 246 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 NLRC3Q7RTR2 1065 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 MRPL21Q7Z2W9 205 aaKnown RBP12.51□□□□□ -0.41
UPK3A-201ENST00000216211 CELF2-AS1Q8N7Q2 184 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 CYB561A3Q8NBI2 242 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 SPRYD4Q8WW59 207 aaPredicted RBP12.51□□□□□ -0.41
UPK3A-201ENST00000216211 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
UPK3A-201ENST00000216211 DACT3Q96B18 629 aaPredicted RBP12.51□□□□□ -0.41
UPK3A-201ENST00000216211 NUDT16L1Q9BRJ7 211 aaKnown RBP12.51□□□□□ -0.41
UPK3A-201ENST00000216211 FAM192AQ9GZU8 254 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 CLN8Q9UBY8 286 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 MEGF8Q7Z7M0 2845 aa12.51□□□□□ -0.41
UPK3A-201ENST00000216211 KIR2DS1A0A191URI9 304 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 MDFIC2A0A1B0GVS7 189 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 ZAR1LA6NP61 321 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 M0R135 149 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 TMPRSS2O15393 492 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 WIPF1O43516 503 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 FSTL3O95633 263 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 PLATP00750 562 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 RNASE1P07998 156 aaKnown RBP12.5□□□□□ -0.41
UPK3A-201ENST00000216211 CCDC159P0C7I6 412 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 PSKH1P11801 424 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 ATP6V1B1P15313 513 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 CA6P23280 308 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 CRHBPP24387 322 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 MTNR1AP48039 350 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 OR8G1Q15617 311 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 SNAI3Q3KNW1 292 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 WDR25Q64LD2 544 aaPredicted RBP12.5□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF841Q6ZN19 808 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 C9orf139Q6ZV77 190 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 PROKR2Q8NFJ6 384 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 OR52L1Q8NGH7 329 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 OR11L1Q8NGX0 322 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 OR2AE1Q8NHA4 323 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 Q8TCH9 128 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 ZNRF4Q8WWF5 429 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 SPTSSAQ969W0 71 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 ERGIC1Q969X5 290 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms